Gene Shewmr4_0129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0129 
Symbol 
ID4250622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp144508 
End bp144804 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content50% 
IMG OID638116672 
Producthypothetical protein 
Protein accessionYP_732267 
Protein GI113968474 
COG category[R] General function prediction only 
COG ID[COG3042] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000902821 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGTTAA CATCACCACT GTTAATCGGC CTGATTATGT GCGGCAGCTT AGCCGGCTGC 
GGCGACAAAA CCGAGCCTGC AACCCAGGCG CCAGCCGAAG TAAAAACTGA AACTAAAGCA
GCAACTAAAG TGAAAATCGC CAATCCAGCC GCCGAATATT GCGTCTCACT GGGCGGCACC
TCGGAAATCC AAAAGACTGC TGAAGGTGAA CAAGGTGTCT GTACTTTGCC AAGCGGTGAA
AAAATTGATG AGTGGGCACT ATTTCGCCGT GACCATCCAC AGGAAAAAGC CCAGTAA
 
Protein sequence
MKLTSPLLIG LIMCGSLAGC GDKTEPATQA PAEVKTETKA ATKVKIANPA AEYCVSLGGT 
SEIQKTAEGE QGVCTLPSGE KIDEWALFRR DHPQEKAQ