Gene Shewmr4_0095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0095 
Symbol 
ID4250974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp105072 
End bp105500 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content52% 
IMG OID638116637 
ProductMarR family transcriptional regulator 
Protein accessionYP_732233 
Protein GI113968440 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACCA CTTCCCTCGG TGAAACCTTG CACAGATTAG TGCATGCCTA CAAAAAACAG 
CTGCGTGCGG ATATTGCTGC GCAGCAGATT GAATTGCCTG TCACCCATAT TCGGGTGCTC
AAGGGGATTT GCCGTCACCC CGAGGCCACG GCGCAATCTA TTGCCCTACG TATGCAGCGG
GATAAAGCCC AAATTACGCG GGTGCTCAAT GAGCTACAGC AGGCTGGTTA TATCCTCAAG
GTCGATAATC CTAAGGATGG TCGTAGTCAG TTGTTGAGAC CGACGGCGCA GGGTGAGCAG
TTGATGACGC AAATTATTGC CGCCGAAAAA GCCACCGTTG CCCATATGAC CCAAGCACTC
GATCAGGATG AAATTGCGGT GTTTATCCGT ATTGCCAACC AGATCAGCGA TAGTGTGGCG
GAAAGCTAA
 
Protein sequence
MSTTSLGETL HRLVHAYKKQ LRADIAAQQI ELPVTHIRVL KGICRHPEAT AQSIALRMQR 
DKAQITRVLN ELQQAGYILK VDNPKDGRSQ LLRPTAQGEQ LMTQIIAAEK ATVAHMTQAL
DQDEIAVFIR IANQISDSVA ES