Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0059 |
Symbol | |
ID | 4250938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 69156 |
End bp | 69776 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638116601 |
Product | hypothetical protein |
Protein accession | YP_732197 |
Protein GI | 113968404 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0155929 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000052316 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | GTGTTCAAAA ATACTGCAAA ATTTTTTGTT ATTTTTTCCG TTTTATTTCT TTCAGGTTGT GCACAAGTCT TAACTGCCGA ACAATCGGCC CCTGAGATCA ATTTCAGTGC AGCAGAAAAA CCACTCACAA TCGCGGTTAT CGACAAACGT GAATACGTAA TTGATAATGA CAAAACACCA GCTTTTGAAG GACTTATTCG CAGTGGCTTT GGTATCCCCT ACTCTTATAA CACTCCCACA AATGAGGCAA TGTCTGTTTA CCTATCCAAC AGACTTGTCG CAGGTTTCAA TAAGAAAGGA ATTAAGGCTG AATCAGTTGA AACCTCACCT AAGATGAGTA TCGATGCAGC GGTTACCCAA GTCAGCAATA AGGGTAATAA ATCGATTATT TTCATTTTAA ATGAGTGGAA ATATGATTAT CACACATTAT CAGATAATTC GTGGTACAAC CTTGACCTGA TGATCATTGA TGAAAATGGC ACAGAGAAAC TCGTCAAAAA CTTCACTGGT GAAAATGATA TTCCTGAAGG CGTAATCGTA AATGAAATGC AACTAATTTA TAAACAACGC TTCGAAGCTA TATTTAAAGA TGCTGAAGTA ATTCAGGCCT TAAATCTATA A
|
Protein sequence | MFKNTAKFFV IFSVLFLSGC AQVLTAEQSA PEINFSAAEK PLTIAVIDKR EYVIDNDKTP AFEGLIRSGF GIPYSYNTPT NEAMSVYLSN RLVAGFNKKG IKAESVETSP KMSIDAAVTQ VSNKGNKSII FILNEWKYDY HTLSDNSWYN LDLMIIDENG TEKLVKNFTG ENDIPEGVIV NEMQLIYKQR FEAIFKDAEV IQALNL
|
| |