| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0037 |
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| Symbol | aroE |
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| ID | 4250653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 40394 |
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| End bp | 41272 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638116576 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_732176 |
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| Protein GI | 113968383 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000234984 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000719905 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACAGATA TGCCTTCAGT AACTACGCCA GCGCTTGATC GATATGCCGT GTTCGGTAAC
CCGATAGGTC ACAGTAAATC GCCCATTATT CATGGACAGT TTGCGTCCCT TACTCTGCAG
CCTTTGAGTT ATGAAGCGAT TCTGGCGCCC ATCGATGGTT TTGAAGCGAG TTTACGAGCA
TTTTTTCAGG CGGGAGGAAA GGGCGCGAAT GTGACAGTGC CCTTTAAAGA ACAAGCCTTT
GCCCTCTGCG ACAGCCTTAG TGCCGAAGCG ACACTGGCGG GTGCGGTTAA TACCTTAAGC
TTGCTGGCCG ATGGCACTCT TTATGGTGAT AACACCGATG GTTTAGGGCT GGTGGCCGAT
CTTCTTCGCC ATCTCGGCAG TTTGCAGCAT AAGCGGGTGC TCTTGGTCGG GGCTGGCGGC
GCGGCGCGCG GCTGTATCTT GCCATTGCTT AAGGCTGAAG TGGGTCAACT GGTCATCACT
AACCGAACTC AAAGTAAGGC GCAGGCCTTA GTGGAGATAT TTAGCCAAGT ACAACAAGGG
CGCTACAGCG ATAAACTCCA AGCGATGTCG ATGCCAGAGT TGTCGGGGGA GTTCGATTTA
GTGATTAACT CGACCTCAGC GAGTCTCGCG GGAGAGCTAC CGCCACTACC ACAGTCCATC
ATCGGCAATA AAACGGCTTG CTACGATATG ATGTATGGCG CAAAACCAAC GGCATTTAAT
CAATGGGCTG TGCAACAGGG CGCAGCGCAA GTGATTGATG GACTAGGTAT GCTTGTCGGT
CAGGCGGCAA AGAGTTTTGC GCTCTGGCGT GGCGTCGAGC CAGATACCTC AGGAGTGCTT
AAATTGCTCA GGGACAAACT ACAGGCCGAC GCGCAATAG
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| Protein sequence | MTDMPSVTTP ALDRYAVFGN PIGHSKSPII HGQFASLTLQ PLSYEAILAP IDGFEASLRA
FFQAGGKGAN VTVPFKEQAF ALCDSLSAEA TLAGAVNTLS LLADGTLYGD NTDGLGLVAD
LLRHLGSLQH KRVLLVGAGG AARGCILPLL KAEVGQLVIT NRTQSKAQAL VEIFSQVQQG
RYSDKLQAMS MPELSGEFDL VINSTSASLA GELPPLPQSI IGNKTACYDM MYGAKPTAFN
QWAVQQGAAQ VIDGLGMLVG QAAKSFALWR GVEPDTSGVL KLLRDKLQAD AQ
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