| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4330 |
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| Symbol | |
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| ID | 4476060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008573 |
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| Strand | + |
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| Start bp | 220472 |
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| End bp | 221449 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639720685 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_863843 |
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| Protein GI | 117676267 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTTA GTTTAGCTCA AACAGCTAGT GCAGAAACCA CACTAAAAGC ACCTGCTGAA
GCAGATCAGA ACCTGCGGGA TATCACTGAA CTGGCGTGTT ATATCTGTGA TGCACCAGTG
GCTATGGTGA CGCGAACCGA TGACACAAAG CTGAATCTAA TTGCAAAAGT TGGTATTTCG
CGTACCTCTG TATTAATTAA AGAGTCCTTT TGCGTGTATG CAATGGAAAC ACCTGATGCG
GTAATGGTGG TCCCTGACGC TACTTTAGAT CACAGATTCA GTACCAATGC TATGGTGATT
TCAGGACCTG GCTACCGATT TTATGCTGGC TCGCCGCTGA TTGATCCCGA AGGTGCAGTG
ATTGGTACTA TTTGTGTCTA TGATCATGTT CCTAAGCAGC TGAACCAGCG GCAGATAAGC
TCTTTGCAGG CTCTGTCCAG ACAAGTGATC GCCATACTGG AGCTGAAAAA AGTCGGCGAA
CAATTACATA ATACCAGCAT GACGGATGCG CTGACAGGGG TGAACAACAG AAGAGCTTTT
GACCTCAAGT TTGAAGCTGA ATTTGCTCGC TGGCAAAGAA CAGGACAATC TTTTGTACTG
GCATTGATTG ATATTGATCA CTTTAAGAGT TTTAACGACA GCTATGGTCA TGCCGCAGGA
GATGAGGCAC TGAGTCAAGT CGCGGCTCTG TTTCAGCGCC ATAGCAGGAA CTATGACTTT
TTCGCCCGTT ATGGTGGTGA AGAGTTTGTG CTGATCCTGC CAGGCACAGA CACAGCGTCC
GCAAATAAAA CACTGGAAAA GTTAAGGCTG GTAGTGGCTA ACCATGAGTG GTTATTACGA
CAATTAACGG TCAGCATAGG TTTGGCCAGC GCTGATTTAT TTGACGACAA AAAGCAGTTG
CTCGAAGTCG CCGATCAGAT GTTATACAAA GCTAAAACCC AAGGCCGCAA TCAAACCAGT
GTGTTCGCCA CACTGTAA
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| Protein sequence | MTFSLAQTAS AETTLKAPAE ADQNLRDITE LACYICDAPV AMVTRTDDTK LNLIAKVGIS
RTSVLIKESF CVYAMETPDA VMVVPDATLD HRFSTNAMVI SGPGYRFYAG SPLIDPEGAV
IGTICVYDHV PKQLNQRQIS SLQALSRQVI AILELKKVGE QLHNTSMTDA LTGVNNRRAF
DLKFEAEFAR WQRTGQSFVL ALIDIDHFKS FNDSYGHAAG DEALSQVAAL FQRHSRNYDF
FARYGGEEFV LILPGTDTAS ANKTLEKLRL VVANHEWLLR QLTVSIGLAS ADLFDDKKQL
LEVADQMLYK AKTQGRNQTS VFATL
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