Gene Shewana3_4315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4315 
Symbol 
ID4476089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp203557 
End bp203949 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content48% 
IMG OID639720672 
ProductMerR family transcriptional regulator 
Protein accessionYP_863830 
Protein GI117676254 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR02051] Hg(II)-responsive transcriptional regulator 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGA CAAGAACTAT CAGTAAAGTT GCCAAAGAAC TGGCTATCAA TATAGAAACC 
GTTCGCTTCT ATGAGCGTCG TGGATTAATA GAGCAACCGC CAAAACCCGA GTTGGGCTAC
CGCCATTATC CCGATGAAAC GGTTAATCGC ATCCGGTTCA TTAAGCGGGC GCAAGAATTG
GGGTTTACCC TGGAAGAGAT CGCCAACCTG CTAAGCTTGA ATGACCGCCC ATGTGCTCAG
GTGCAGGAGC TGGCCGAGTA TAAACTCAGC GCCGTCATGG AAAAAATTGC CGATCTGAAG
CGGCTCGAAA GCGCACTCAA GGCATTATTG ACGCAATGTC AGAGTAATAA CGATGACTCA
CATTGTCCCA TTATCGACTC CCTGCAACCT TAA
 
Protein sequence
MNMTRTISKV AKELAINIET VRFYERRGLI EQPPKPELGY RHYPDETVNR IRFIKRAQEL 
GFTLEEIANL LSLNDRPCAQ VQELAEYKLS AVMEKIADLK RLESALKALL TQCQSNNDDS
HCPIIDSLQP