Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4300 |
Symbol | |
ID | 4476074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | + |
Start bp | 183606 |
End bp | 186752 |
Gene Length | 3147 bp |
Protein Length | 1048 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639720657 |
Product | CzcA family heavy metal efflux protein |
Protein accession | YP_863815 |
Protein GI | 117676239 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAAT GGATTATCCG GCGCTCTGTC GCCAACCGTT TCCTGGTCAT GATGGGGGCC CTGTTTCTCA GCATCTGGGG TACATGGACG ATTATTAACA CGCCGGTCGA TGCCTTGCCT GACCTGTCAG ATGTGCAGGT CATTATTAAA ACCAGCTATC CCGGCCAGGC CCCGCAGATT GTAGAAAACC AGGTCACCTA TCCACTTACC ACCACCATGC TCTCCGTACC TGGCGCAAAA ACTGTGCGTG GTTTTTCACA GTTCGGTGAT TCGTATGTAT ATGTCATTTT TGAAGACGGC ACCGATCTGT ACTGGGCCCG TTCCCGCGTG CTGGAATATC TGAATCAGGT TCAGGGAAAA CTGCCCGCCG GGGTGAGTTC TGAAATCGGT CCGGATGCCA CGGGTGTGGG CTGGATTTTT GAATATGCCC TTGTCGATCG CAGCGGAAAA CACGACCTTT CAGAACTGCG TTCTCTGCAG GACTGGTTCC TGAAGTTTGA GCTGAAAACC ATTCCTAATG TCGCTGAAGT TGCATCCGTA GGCGGCGTGG TTAAGCAGTA TCAGATCCAG CTTGACCCGG TAAAACTGAC GCAGTACGGC ATCGGTCTGC CAGAAGTAAA ACAAGCTCTT AGCTCATCTA ACCAGGAAGC CGGTGGCTCA TCTGTTGAAA TTGCTGAGTC AGAGTATATG GTCCGGGCCA GCGGTTATCT TCAGACTATT GATGATTTCA AAAATATCGT CCTGAAAACG GGGGAAAATG GAGTACCTGT TTACCTGCGT GATGTTGCCC GCATACAAAT GGGACCGGAA ATGCGGCGTG GTATCGCTGA GCTTAACGGT CAGGGCGAAG TCGCTGGCGG AGTGGTGATC CTGCGTTCGG GCAAAAATGC ACGCGAAGTC ATTACGGCGG TGAGGGATAA ACTGGACACG CTGAAGGCAA GCCTGCCTGA AGGAGTGGAG ATCGTAACGA CATACGATCG CAGCCAGTTA ATCGATCGTG CGATTGACAA CCTCAGTTAC AAGCTTCTTG AAGAGTTTAT CGTTGTTGCT GTCGTTTGCG CACTGTTCCT CTGGCATGTC CGTTCTGCCC TGGTGGCGAT TATTTCTCTG CCACTTGGCC TGTGTATCGC CTTTATCGTC ATGCACTTCC AGGGGCTGAA TGCCAACATT ATGTCGCTGG GAGGGATTGC AATAGCCGTC GGAGCGATGG TGGATGCCGC CATCGTCATG ATCGAAAACG CGCATAAACG GCTTGAGGAG TGGGACCATC AGCATCCCGG GGAACAGATT GATAATGCCA CCCGCTGGAA GGTTATCACT GACGCCTCCG TTGAAGTGGG TCCAGCGCTG TTTATCAGCC TGCTGATTAT CACATTATCG TTCATTCCTA TTTTTACCCT GGAAGGGCAG GAAGGGCGTC TGTTTGGTCC GCTGGCCTTT ACAAAAACGT ATTCCATGGC GGGTGCAGCC ATACTGGCAA TCATTGTTAT CCCTATTCTG ATGGGGTTCT GGATCCGCGG GAAAATTCCT GCTGAGACCA GTAACCCACT GAACCGGTTG CTGATTAAAG CGTATCACCC GTTACTGCTC AGGGTACTAC ACTGGCCAAA AACAACCCTG CTGGTTGCGG CTTTATCCAT TTTCACTGTT ATCTGGCCAC TGAGTCAGGT GGGCGGCGAG TTTTTACCGA AGATTAACGA AGGTGACCTG TTGTATATGC CGTCAACGTT ACCTGGCGTG TCTCCTGGAG AAGCTGCTGC GCTCTTACAG ACCACGGACA AACTAATCAA AACGGTGCCT GAAGTGGCCT CAGTTTTTGG CAAGACCGGT AAGGCTGAGA CCGCCACGGA TTCTGCTCCG CTCGAAATGA TGGAAACCAC CATCCAACTG AAACCTGAGG ATCAGTGGCG TCCAGGCATG ACGATTGACA AGATTATTGA AGAACTCGAC AGGACCGTCC GTTTACCGGG TCTGGCCAAC CTCTGGGTAC CGCCTATCCG TAACCGTATT GATATGCTCT CAACCGGCAT TAAAAGTCCG ATAGGTATTA AGGTATCGGG TACTGTTCTG TCGGATATCG ATGTAACAGC ACAGAGTATC GAAGCAGTCG CTAAAACCGT ACCTGGTGTG GTTTCCGCAC TGGCTGAACG ACTGGAAGGT GGACGTTATA TTGATGTGGA CATTAACCGG GAAAAAGCTT CCCGGTACGG GATGACTGTG GGCGACGTCC AGCTGTTCGT CTCTTCAGCA ATCGGTGGGG CTATGGTGGG TGAGACGGTT GAAGGCGTGG CCCGGTACCC TATTAACATT CGCTATCCGC AGGATTACCG TAACAGTCCG CAGGCGTTGA GAGAGATGCC AATCCTGACC CCAATGAAGC AGCAAATTAC GCTGGGCGAT GTTGCCGATA TTAAGGTCGT TTCCGGACCA ACCATGCTGA AAACCGAAAA TGCCCGGCCA GCCAGCTGGA TTTATGTTGA TGCCCGCGGC AGGGACATGG TGTCGGTGGT GAACGATATT AAGACGGCCA TCAGTGAGAA AGTGAAACTG AGACCGGGGA CCAGTGTGGC ATTCTCAGGA CAGTTTGAAT TACTCGAGCA CGCCAATAAG AAATTAAAAC TGATGGTACC GATGACGGTG ATGATCATCT TCATCCTGTT ATATCTGGCA TTCCGCAGGG TTGATGAAGC CCTGTTGATC CTGATGAGCC TGCCGTTTGC CCTGGTTGGC GGGATATGGT TCCTGTACTG GCAGGGCTTC CATATGTCAG TGGCGACCGG AACCGGGTTT ATCGCCCTGG CCGGGGTGGC AGCAGAGTTT GGCGTGGTCA TGCTGATGTA TCTGCGTCAT GCCATTGAAG CGCACCCGAA ATTGTCCCGT AAAGAGACGT TCACACCGGA AGGCCTTGAT GAAGCCCTCT ATCATGGTGC CGTACTGCGT GTCCGGCCGA AAGCCATGAC CGTGGCGGTG ATCGTTGCGG GTCTGCTGCC AATACTCTGG GGAACCGGTG CAGGTTCAGA AGTCATGAGC CGTATCGCGG CACCCATGAT TGGTGGGATG ATCACGGCTC CGCTGCTGTC CCTGTTCATT ATTCCTGCCG CCTACAAATT AATCTGGCTG CGCAGACATA AAAAAAGCGT GTCCTGA
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Protein sequence | MIEWIIRRSV ANRFLVMMGA LFLSIWGTWT IINTPVDALP DLSDVQVIIK TSYPGQAPQI VENQVTYPLT TTMLSVPGAK TVRGFSQFGD SYVYVIFEDG TDLYWARSRV LEYLNQVQGK LPAGVSSEIG PDATGVGWIF EYALVDRSGK HDLSELRSLQ DWFLKFELKT IPNVAEVASV GGVVKQYQIQ LDPVKLTQYG IGLPEVKQAL SSSNQEAGGS SVEIAESEYM VRASGYLQTI DDFKNIVLKT GENGVPVYLR DVARIQMGPE MRRGIAELNG QGEVAGGVVI LRSGKNAREV ITAVRDKLDT LKASLPEGVE IVTTYDRSQL IDRAIDNLSY KLLEEFIVVA VVCALFLWHV RSALVAIISL PLGLCIAFIV MHFQGLNANI MSLGGIAIAV GAMVDAAIVM IENAHKRLEE WDHQHPGEQI DNATRWKVIT DASVEVGPAL FISLLIITLS FIPIFTLEGQ EGRLFGPLAF TKTYSMAGAA ILAIIVIPIL MGFWIRGKIP AETSNPLNRL LIKAYHPLLL RVLHWPKTTL LVAALSIFTV IWPLSQVGGE FLPKINEGDL LYMPSTLPGV SPGEAAALLQ TTDKLIKTVP EVASVFGKTG KAETATDSAP LEMMETTIQL KPEDQWRPGM TIDKIIEELD RTVRLPGLAN LWVPPIRNRI DMLSTGIKSP IGIKVSGTVL SDIDVTAQSI EAVAKTVPGV VSALAERLEG GRYIDVDINR EKASRYGMTV GDVQLFVSSA IGGAMVGETV EGVARYPINI RYPQDYRNSP QALREMPILT PMKQQITLGD VADIKVVSGP TMLKTENARP ASWIYVDARG RDMVSVVNDI KTAISEKVKL RPGTSVAFSG QFELLEHANK KLKLMVPMTV MIIFILLYLA FRRVDEALLI LMSLPFALVG GIWFLYWQGF HMSVATGTGF IALAGVAAEF GVVMLMYLRH AIEAHPKLSR KETFTPEGLD EALYHGAVLR VRPKAMTVAV IVAGLLPILW GTGAGSEVMS RIAAPMIGGM ITAPLLSLFI IPAAYKLIWL RRHKKSVS
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