Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4230 |
Symbol | |
ID | 4475954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | + |
Start bp | 103994 |
End bp | 105601 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639720588 |
Product | hypothetical protein |
Protein accession | YP_863746 |
Protein GI | 117676170 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.069904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0076308 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGTTTAA TGGCTTCGGG AGAAAGGAAA GCGAATTTAT GCTTGCTTGA AAGAAATCGA TGTTATCCGC AAACATTAAT CTTAAATTAT TCTATAGTGC TATATAAGGA TGTTTCTCTG AAATACAAGA TGTTATCATT GGCCATCACA GTCTCTCTTG CTGGCCCAAT CCACGCAAGT GAGTTACCGA TGTTGTTGGA CAGACCCGCT GACTCTATTC CATTGGATAG GTCTATAGAG ACAAAGCTCA AGCAAGCAGG GGGTTCTCCT TCGATTATTG CAAAGGCGGT AGCGTTGTCA GCGGCTAACA TCAATATAAA CGCTGATGCT GAGAACGCAG AGATTAACTG CAAGCCATAT CCTCGTGGTA AATACTCTCA AACACTGGTT CAGGATTGCA CCACTGTACC TGTTGATCTC TCCAAGACCG TAGCAGATGT GATTTTCTTT TATCACCCTC GTTGGATGGA GCAAATGCCA TCGAAGGGGC AGGCATTTAA AGCAATCAGA GAAGAAATAG CTACAACAAA TAGGGTGTTA GCTCAAAATA CTCCTGCACA GCTCAAACTG GTAGCATTTG AAGAGCCGAC GTTTGCTGGC TATCGAGATT TCGAAGTGGC TTTATATGGC GGGGAAGAAA AATACCAAGA ATTACTCGCT GTGGGTTTGG ATGAAGTGCC AAACAGCTTC GATGCCTATA ACAATCGTTC ATCTAGCTAC ACCTACCAAG GTGAAAAGTG GACTAAGTAT TATTATGGCG CTGAAGGGAT GTTAAATCTG TCGTGGAACT ATTTACCATT TTATTTAAGT GGGCGAATGG GTATTGAGAC TCTGCCAGAA GATACCAAGA TGCTGTTAGA TTACAGCCCA GACATTGAAA TTTATGGTCG TTTAGCCGAG CCTGAATACA GTGATTTCGA AAAAACACTC TGTGGCTCAG CTGGATTTAA CGCTGCACAG CTTACGTCCC ATGGTGTAAA TACCTGCCCG AACACCGTTG TGCATGAAAT AGGGCATGTG TACTTGGCCG ATCATGACCT AGCGCACCGC AATACCGATA ATATCGCTAA ATTTAAACGT GCTACTGATT CCCCTTGTGA TGGCGGTTAT ACGGTAATGA CTTGGCAATC ATCTCCGGAC ACCAAACTGT ATTATTCATC CCCTGAAGTG ATTGTAAATG GTAGTGTTTG TGGCGATGAA AGCCTGAGTT TTGTTGTGTC TCGTAACGGC GATTTATCAA AGTCAGCGTC GGTGAAAGTG TTCATTGATA ACGCGGTAAC ACTGCTGGAT TCAGATTTTA TTGATGTGAA GTTTGCCGCC GGTGAAAGCA CTAAATCTGT TGTAGTAAGC ATCATAGACA ATGCCTCAAC CGCTGAAAAC AGTAGTTTAG TGGCGGAACT TGTTACCCCA AGACTATTGA AGGTGACGGG CAGTACGATG GCGATCACTA TCAACAATGA CGATGTACTA CCTGTGGTGA CTCCGCCGAC TACCTCGACT ACTCCAACCA CCCCAACAAC ACCAGAGCCG GAATCATCTA GTGGTGGCGG GTCATTAGGG TATATCAGTC TCGTTTTCCT CGCCTTAGCT AGACGATTAC GAAAATAA
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Protein sequence | MGLMASGERK ANLCLLERNR CYPQTLILNY SIVLYKDVSL KYKMLSLAIT VSLAGPIHAS ELPMLLDRPA DSIPLDRSIE TKLKQAGGSP SIIAKAVALS AANININADA ENAEINCKPY PRGKYSQTLV QDCTTVPVDL SKTVADVIFF YHPRWMEQMP SKGQAFKAIR EEIATTNRVL AQNTPAQLKL VAFEEPTFAG YRDFEVALYG GEEKYQELLA VGLDEVPNSF DAYNNRSSSY TYQGEKWTKY YYGAEGMLNL SWNYLPFYLS GRMGIETLPE DTKMLLDYSP DIEIYGRLAE PEYSDFEKTL CGSAGFNAAQ LTSHGVNTCP NTVVHEIGHV YLADHDLAHR NTDNIAKFKR ATDSPCDGGY TVMTWQSSPD TKLYYSSPEV IVNGSVCGDE SLSFVVSRNG DLSKSASVKV FIDNAVTLLD SDFIDVKFAA GESTKSVVVS IIDNASTAEN SSLVAELVTP RLLKVTGSTM AITINNDDVL PVVTPPTTST TPTTPTTPEP ESSSGGGSLG YISLVFLALA RRLRK
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