| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4208 |
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| Symbol | |
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| ID | 4475879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008573 |
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| Strand | - |
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| Start bp | 76728 |
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| End bp | 78023 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639720566 |
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| Product | hypothetical protein |
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| Protein accession | YP_863724 |
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| Protein GI | 117676148 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02742] type-F conjugative transfer system pilin assembly protein TrbC |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000759939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTACCT CATTATCTAA TAGACAGTTT CTTGTTAGCT TGTTTGTGGC GGTATCGATG
TCTGCCATTT ATTTCGATGC AATGGCTACA GACGATAATC AGCAGTTTAT TCTGGATGCA
AAACGACAGA TGGATGACGT CCGTAGCCAA ATCGAGGCTA TGAGGCAGAA CAATACCCAG
CAGCCCCAAG GTGGCCTCCC CGCTGCTTGG GGGCAGCAAT CTTACATTTC ACAAGCACAA
ATGCTCACCC AGCAGGCCGA TGCGATCAGG TATCAAGTGC TGCCAAAGCC AGAACCTGTC
ACGCCTGTTG TGCAGCAAGA GATAGCCGCA AACGGAGAGG TATTCATTTT CGCTTCATTC
GGTATGCCAG CATACACGCT GAAATCAGCG CTGAGAGCAG CATCTCAAAG CCAAGTTAAA
ACAACAGTCG TATTTAGAGG CCTGAAAGAT GAATCTGAAA GCCTGCGTGA TGCCTCCAAC
GCCATTCATA GAGCGATAGA TGAAGCAGAT TTAGATGTGA CTCCAAGAGT TATCATCGAC
CCTCGTTTGT TTAATACCTA TGCAGTCGAA GTAGCGCCAA CAATGGTGTA TCGCAACGGT
GGCAAAGTGG TTACCGCGAC AGGGCTACAG TCATTAGAAG ATTTCGTTAA GCAGTCCGAA
GGCTTGTTGC AAAGCGGCTC GCTCGGGAAG TTGTCAGACA CTTACGACAT TACTGAGATG
GACATGCTCG AACTTATCCA ACAGAAGCTC AAAAAAGTAG ATTGGGAAGA GAAAAAGCAC
GAGGCCGTTA GCCGATTCGT TAACCGTAAA GAGGTTCAGT TGACAGAGAG CCTTAAAGAC
GAGGATGTGC GTTACAAAAT TGACCCGCGT GTTCGCTTTA CCCAAGACCA AACAACGCCG
GATGGCCAGT ATTTTGCCAA GGCCGGTGAT GTTGTAGATC CTACAGCATT ACTCCAAATG
GAAACCCGCT TATTCATGAT TGACCCAACC AGTGAGCGTC AGCTGGCGTG GATGAATGAT
GTACTTTCCG TGACAGATCA CAAGCAAGTT TACGTGCTGC TATCAGCTCT GCCAGCGGGT
AGCGATTTAA CCGAATTTAA CCGGTTGCAG ACAAAACTAG GCCGTCGCTT GTACTTGATG
CAACCGACGA TGGTGTCTCG TTTTCAGCTT GAGCATTTAC CCGCATTAGT TGATTTGTTT
AAGGGAGAAA TCCGCGTCAC TGAGATTGGT CAACGAACTC TGAGTAATGC GGGATTACCG
ACACTATTAG TAGCTCCAAA TGGCGGTGCC AAATGA
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| Protein sequence | MLTSLSNRQF LVSLFVAVSM SAIYFDAMAT DDNQQFILDA KRQMDDVRSQ IEAMRQNNTQ
QPQGGLPAAW GQQSYISQAQ MLTQQADAIR YQVLPKPEPV TPVVQQEIAA NGEVFIFASF
GMPAYTLKSA LRAASQSQVK TTVVFRGLKD ESESLRDASN AIHRAIDEAD LDVTPRVIID
PRLFNTYAVE VAPTMVYRNG GKVVTATGLQ SLEDFVKQSE GLLQSGSLGK LSDTYDITEM
DMLELIQQKL KKVDWEEKKH EAVSRFVNRK EVQLTESLKD EDVRYKIDPR VRFTQDQTTP
DGQYFAKAGD VVDPTALLQM ETRLFMIDPT SERQLAWMND VLSVTDHKQV YVLLSALPAG
SDLTEFNRLQ TKLGRRLYLM QPTMVSRFQL EHLPALVDLF KGEIRVTEIG QRTLSNAGLP
TLLVAPNGGA K
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