Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4168 |
Symbol | |
ID | 4475909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | - |
Start bp | 33318 |
End bp | 34007 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639720526 |
Product | hypothetical protein |
Protein accession | YP_863684 |
Protein GI | 117676108 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0186772 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACAAAC TGAAGCAAGA AGTGCCAGTT TCACATGCCC TAGATTTTGC TGATGTGAGC GATGCATTGA TCCACATGGA GCGCCACGCT GACCAAATAC AAGAAATTTC AAAAAATGCC ACAGATAACG CTGCGATGGT CGTATCTGCA GCTACAGATA TTGATGCAGA TATTGGCAGT ATTATTAGCA GCTATTTTTT TGCTAGTCAG AATCACTCTG AAGAGGAATA CAACAGACAT TGTTTATTTG ATGAATTACT AATCGAATCT ACAGTAATGA GTTACAACAC AAAGCGTGAT ATTTTATTGA AAATCCTCAA TGTAACCTCA TATTGCACCG GTAAGAAGAA GGCTAATTTA CAGGAGGACT TGAAGAAAAT TCAGGAATGG CGAAATGCCG TTGCTCATGG CACGTTTCAA ATGATGGTAA AGACCTTTGA GGTTCATTTA AATTACCAAT CAGGGGGAGA AAAAGTCCTA CTGCTCTCCG ATGAGTTCTG GATGAATGTT GACCAAACAA TTGAAAGAAC CAAGTCAACT CTGTCTCAGA TAGAGACCTG TATTCTTAAA GAGCGTGGCT GTTATCAAAA GACAGGTGAT GATCCTGAAT TTGATAAAGA GTTGGAACTC GAGTACCAAT CAATTAATAA CCAATTAACT GAACGATTTG ATGAAGGATG GAAGGAATAA
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Protein sequence | MYKLKQEVPV SHALDFADVS DALIHMERHA DQIQEISKNA TDNAAMVVSA ATDIDADIGS IISSYFFASQ NHSEEEYNRH CLFDELLIES TVMSYNTKRD ILLKILNVTS YCTGKKKANL QEDLKKIQEW RNAVAHGTFQ MMVKTFEVHL NYQSGGEKVL LLSDEFWMNV DQTIERTKST LSQIETCILK ERGCYQKTGD DPEFDKELEL EYQSINNQLT ERFDEGWKE
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