Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4157 |
Symbol | |
ID | 4475933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | - |
Start bp | 19416 |
End bp | 20315 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639720515 |
Product | Co/Zn/Cd efflux system component |
Protein accession | YP_863673 |
Protein GI | 117676097 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1230] Co/Zn/Cd efflux system component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.162332 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACCA CATGCGGTGG CAATTGCCAA AATAACGCGA CGGAGAACAC TCCCCAAATT GCCGAAGTAC ACGACGCTTC TCATGGCGGC TTTGTTAGTG AGTATCATGT CCCCAAGATG GACTGTCCTT CAGAGGAAGG CATGATCCGT ATGGCGTTGG ACAGTGTGCA TCCTAAAGTC ACATTGGAAT TCGATACCCC CAAGCGCAAG GTGAGTGTCT ACCATGGTGA TAACGCTGAC CTTATTAAAA AAAGAATGCA ATCAGTCGGT CTGGGCGCGA GACTTGTCAG TACAATGCCC GTCGCCAGCG AGTCCATCGC CCGTGCGCAG GCGTCTGCAA AACAGGAGGC AGAAAGAGAA GCTGGCATTC TCAAGTGGCT ACTGGCAATC AATGGCATCA TGTTTGTCAT TGAAATTACT GTCGGCTGGT GGGCGCAATC CACTGGTTTG ATTGCGGACT CCCTGGATAT GTTCGCTGAT GCCGCCGTCT ACGGCGTGGC GCTGTATGCC GTAGGGCACA GTGTGCGGAT GAAGTTGCGT GCAGCCCATT TTTCCGGTTG GCTTCAGATC ATTCTCGCCT TGGGCGCTTT GGGCGAGGTG GTAAGGCGAT TAGTATTGGG TAGTGAACCG GTTTCCACTT TGATGATGAG CTTCGGGCTT GTTGCCTTGG CGGCCAATGT GACCTGTCTG CTGTTGATTG CCAAAAGCCG GGATAGCGGC GCCCATATGA AAGCCAGCTG GATTTTCTCC GCCAATGACG TGATTGCCAA TCTAGGGGTG ATCCTTGCCG GTGGATTGGT GGCCTGGACG GGCTCACGTT ATCCAGACTT GGTGATTGGC CTTATCATCG GTTTGATTGT GTTGAATGGT GCGCGCCGTA TCTTGCAGCT CAAGTCCTGA
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Protein sequence | MTTTCGGNCQ NNATENTPQI AEVHDASHGG FVSEYHVPKM DCPSEEGMIR MALDSVHPKV TLEFDTPKRK VSVYHGDNAD LIKKRMQSVG LGARLVSTMP VASESIARAQ ASAKQEAERE AGILKWLLAI NGIMFVIEIT VGWWAQSTGL IADSLDMFAD AAVYGVALYA VGHSVRMKLR AAHFSGWLQI ILALGALGEV VRRLVLGSEP VSTLMMSFGL VALAANVTCL LLIAKSRDSG AHMKASWIFS ANDVIANLGV ILAGGLVAWT GSRYPDLVIG LIIGLIVLNG ARRILQLKS
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