Gene Shewana3_4133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4133 
Symbol 
ID4480350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4967695 
End bp4968228 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content47% 
IMG OID639728751 
ProductF0F1 ATP synthase subunit delta 
Protein accessionYP_871756 
Protein GI117922564 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0221987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0205692 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAT TAACCACCAT CGCTCGCCCT TACGCAAAGG CAGCTTTTGA CGTTGCTGTT 
GAACACAATG CAGTGGATAC CTGGGCAGAA ATGCTCACGT TCGCCGCACT GGTTAGTGAA
AACGAAACCA TGCAGCCACT GCTAACTGGT TCTTTAGCCA GTACTAAACT TGCTGCACTC
TTTATTAGTG TGTGTGGTGA GCAAATCAAT GAGCAAGGTC AGAACTTGAT AAAGGTAATG
GCTGAAAACG GTCGCTTAAA GGTACTACCT GCTGTATCTG AGCTTTTTGC TCAATACCGT
AATGAGTGGG CAAAAGAAGT GGAAGCCGAT GTGGTTTCTG CAGCTGAGCT CAGCTCTGAA
CAACAGCAGC AGATCAGTAA TTCTTTAGAG AAACGTCTCG CACGCAAAGT TAAGCTGAAT
TGCAGCACTG ACGCCGCGCT CATCGCCGGT GTAATTATTA AGGCAGGTGA CTTAGTCATT
GATGGCTCTG TCCGCGGTAA GTTATCGCGT CTGTCTGAAA AGCTGCAGTC GTAA
 
Protein sequence
MAELTTIARP YAKAAFDVAV EHNAVDTWAE MLTFAALVSE NETMQPLLTG SLASTKLAAL 
FISVCGEQIN EQGQNLIKVM AENGRLKVLP AVSELFAQYR NEWAKEVEAD VVSAAELSSE
QQQQISNSLE KRLARKVKLN CSTDAALIAG VIIKAGDLVI DGSVRGKLSR LSEKLQS