Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4100 |
Symbol | |
ID | 4480314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4922397 |
End bp | 4923419 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639728715 |
Product | glycosyl transferase family protein |
Protein accession | YP_871723 |
Protein GI | 117922531 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.240394 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCTC TCTGCCTGCT TAGGCTATCG GCTATCGGTG ACGTCTGTCA TGCCGTGGCT ATGGTGCAGG CGATTCAACG CCAATATCCC CAGCTCAAAA TCACTTGGGT GATAGGCAAG CTCGAATACC AACTATTAAA GCACTTGCCC GGTATTGAGT TTGTGATTTT CGATAAATCC CAGGGCTGGC GCAGTTACTT TAATCTGCAT AAGGCATTGA AAGGCCGCCG TTTTGATGTG CTGCTGCATA TGCAAGTGGC GCTGCGTGCG ACCTTGGCCT CCCTCGCGAT TTCGGCAAAG ATTCGGGTCG GATTCGACCG TGCCCGCGCC AAAGAAGGTC AATGGCTGGT CACCAATCAT AGAGTCGAAC CTTTAGCTGA GCCCCATGTG CTGGACGGCT TTATGGGATT CGCCAAGGCG ATTGGCGTTA GCGATATCAC CCCGAGTTGG AATATTCCAG TCCCTCAGGC GGATACTGAA TTTGCCCAGC GCCAGATTGC CGATGGCGAG AAGGTATTGG TTATTTGCGC GGCCGCCAGT AAAGCCGAGC GTAATTGGCT GCCCGAGCGT TATGCCGCAG TGGCACAACA TGCGGTGAAT AAGGGTTATC GAGTCATTCT CTGCGGTGGT CCAACAGCAC TTGAAAATAC ATTGGCCAAC GATATTGCCA ATGCATGCTC TGCCAAACTC GATAACTTAG TCGGCAAAAC CAGTTTGACT CAATTGCTGG CTCTGCTGAA ACGCGCCAGC CTAGTGCTAG CGCCCGATAC TGGCCCTGCA CACATGGCGG TCACGCAAGG GACGCCAGTC ATAGGTTTAT ATGCTCATTC TAATCCAGGT CGCACCGGGC CTTATTTATC GCAGCAGTAT GTGGTGAGCG CCTACCAAGA GGCCATCGCC TTACAGCAAA GTGGTGAGGT GAAATGGGGT ACCCGTGCTA AGGGTGAGCA CCTTATGGCG CTAATTAGTG TCGAAGCCGT GATAGAGAAA TTTGATCAGG TTATTCAGCA GACACACAGT TAA
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Protein sequence | MNSLCLLRLS AIGDVCHAVA MVQAIQRQYP QLKITWVIGK LEYQLLKHLP GIEFVIFDKS QGWRSYFNLH KALKGRRFDV LLHMQVALRA TLASLAISAK IRVGFDRARA KEGQWLVTNH RVEPLAEPHV LDGFMGFAKA IGVSDITPSW NIPVPQADTE FAQRQIADGE KVLVICAAAS KAERNWLPER YAAVAQHAVN KGYRVILCGG PTALENTLAN DIANACSAKL DNLVGKTSLT QLLALLKRAS LVLAPDTGPA HMAVTQGTPV IGLYAHSNPG RTGPYLSQQY VVSAYQEAIA LQQSGEVKWG TRAKGEHLMA LISVEAVIEK FDQVIQQTHS
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