Gene Shewana3_4099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4099 
Symbol 
ID4480313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4921259 
End bp4922344 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content48% 
IMG OID639728714 
Productglycosyl transferase, group 1 
Protein accessionYP_871722 
Protein GI117922530 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.342089 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATAG CCATAGCCAT CGACAGTTTA GCGGGTGGTG GAGCCGAGAA GGTCATGATT 
ACCTTGGCAA AGCAGTTTAT TAGCCTAGGG CATGAGCCGC ATTTTTTGGT CATGGAAGAT
AATCGTTATT ACGAAACCCC AGACAATTTA CCTGTTCATC AATGCTTTGC CGACAAAGAT
AAAGATTATG ATCACTTCGG GCGCCTAGGG GCGTCGGTCG ATAAGTTACG GGCCAAGATT
GCCGAGATTG AGTCCCGAGT CGGTAAGTTC GATCTGTTTT TATCCAATCT TGATAAAACT
AATTTGATGA TGACCAAAAC TGGGGTGACA CCACTCTATG TGATTGTGCA TTCGTCGGTT
GAAGAAGAAT TAAGTCGTCA GTTTAAGTTA GGCCCCTTCG CCTACTATAA GAAACTGCGG
GCGAAAAAAG CGCTCAATGG CCAGCATTTG ATCACTGTGT CCAACGGCAT CGCCAAAGAG
ATTCAAGCTA AGGGACGCTT GCAGCCAGCA TCCATGCGAA CTATCTACAA TCCATTTGAA
TTTAATGAGA TTGTTGCTCA GTCACAGCAA GATAATCCGC AAATCCCTCA GGGTGACTAT
CTGATCCACG TGGGGCGTTT TGCTAAGCAG AAGCGCCACG ATGTGTTATT TGAGGCCCTT
AAACAGACCC AAAATCAGTT ACCCGTGGTG CTGTTATGCC ATAACCACAA GAAGGCGATT
AAAGCGGCGA AGAAATACGG CATCGAGAAG CGTTTAATCA TTCCTGGGTT CCAGAGTAAT
CCTTTTCCTT GGATCAAACG TGCGAAAGCA CTGGTGCTGA GTTCCGATTT CGAAGGATTG
CCGACGGTAT TAATCGAATC CTTAGCCTGC GGCACGCCAG TGGTCAGTAG CGATTGCCCA
CATGGGCCGA ATGAGATTTT GACTGGAAAT TTGGCTCCCT ATCTTGTTCC CCGTCGTAAT
CCTGCGGCCT TGGCCAAGAT GATTGACGCC GTGGTCGCCC AGCCGCCATC CCTCGACAAT
GTGGAGATTT TAGCTAAGGT GGATGCGACT GCGATTGCCG AACAATATCT CGCGCTAGCG
AAATAA
 
Protein sequence
MRIAIAIDSL AGGGAEKVMI TLAKQFISLG HEPHFLVMED NRYYETPDNL PVHQCFADKD 
KDYDHFGRLG ASVDKLRAKI AEIESRVGKF DLFLSNLDKT NLMMTKTGVT PLYVIVHSSV
EEELSRQFKL GPFAYYKKLR AKKALNGQHL ITVSNGIAKE IQAKGRLQPA SMRTIYNPFE
FNEIVAQSQQ DNPQIPQGDY LIHVGRFAKQ KRHDVLFEAL KQTQNQLPVV LLCHNHKKAI
KAAKKYGIEK RLIIPGFQSN PFPWIKRAKA LVLSSDFEGL PTVLIESLAC GTPVVSSDCP
HGPNEILTGN LAPYLVPRRN PAALAKMIDA VVAQPPSLDN VEILAKVDAT AIAEQYLALA
K