Gene Shewana3_4093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4093 
Symbol 
ID4480307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4915422 
End bp4916492 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content48% 
IMG OID639728708 
Productglycosyl transferase, group 1 
Protein accessionYP_871716 
Protein GI117922524 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TCGCCATTTT TTGCCATAAC TTTTTCTCGA ACGGCACAGT CAAAATCGCC 
TTATCCCAGG CCGAAGTGCT GCAGGAAGCC GGGCAAGATG TTCACCTCTT TGTGTTCCAT
AAAGAGGGGG ATTTTATGCC GCCAGAAAAT GTGACGATTC ATTATCTTTA TGAAGCTGGC
CAAAAGCCAA GCCTACAGGA GCAAAGACAA CGCCTGCAGG CCAAGGTGGC CGAAGCGGAA
CAATCGGGTA AGTTCTCGCT ATTTTTAAGT AACTCGACCG ATTGCGATGT CGTTGTTTCC
GGCTGCGATT TCGATCCCTG CTATTACTTT TGCCACTGCG CCCTTAAGCA AGAACTCTTG
ATGGAATTAA AGCGTGGTCC AGTGCATTTC TGGCGTCGCT GGAAAAAGGC TAAGGCACTG
ATTGGCAAAA AGATCATTAC AGTTTCCAAT GGCATCGCCG ATGAGCTCAG AGCCACTTCC
TGGCTCAAAC CACAAAGCGT TCAGACAATC TATAATCCCT TTAGATTGGA GGAAATCCGC
AAGAAGACTC AGGAAGAAAT TGCCGAGATC CCAAGTGAGC CTTATATGAT CCATGTCGGC
CGCGTGACAC GGCAAAAGCG CCACGATATT TTGTTTAAGG CACTCAGGGA TATGCCAACA
GCCCCTAAGC TTGTCCTGCT GTGTAATCGC CCCAAGAAGG CACGCAAACT CGCTAAGAAA
TACGGTGTCG AACACAGAAT CATCACACCA GGGTTTCAAC ACAATCCCTA CGCTTGGATT
GCCAAGGCCG AGTTGATGTT ACTCAGCTCA GATTTTGAAG GCTTACCGAC CGTGGTAATT
GAGTCTTTAG CCTGTGGTAC GCCTGTCGTC AGTACTGACT GCCCACATGG GCCCAATGAA
ATTCTCACAG GGCATTTAGC ACAATATCTC GTCCCCGTTC GCCAACCCGC GCTGTTGGCA
CAAAAGGCAC TGGAGTGTTT GGCCTCACCA CCCGCTTTAG ACAATCTAGA AATATTAAAG
GCCGTAGACA GCCAATATAT TGCCGCTCAA TATATTAATT TAACAATTTA A
 
Protein sequence
MKKIAIFCHN FFSNGTVKIA LSQAEVLQEA GQDVHLFVFH KEGDFMPPEN VTIHYLYEAG 
QKPSLQEQRQ RLQAKVAEAE QSGKFSLFLS NSTDCDVVVS GCDFDPCYYF CHCALKQELL
MELKRGPVHF WRRWKKAKAL IGKKIITVSN GIADELRATS WLKPQSVQTI YNPFRLEEIR
KKTQEEIAEI PSEPYMIHVG RVTRQKRHDI LFKALRDMPT APKLVLLCNR PKKARKLAKK
YGVEHRIITP GFQHNPYAWI AKAELMLLSS DFEGLPTVVI ESLACGTPVV STDCPHGPNE
ILTGHLAQYL VPVRQPALLA QKALECLASP PALDNLEILK AVDSQYIAAQ YINLTI