Gene Shewana3_4088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4088 
Symbol 
ID4480302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4910795 
End bp4912024 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content48% 
IMG OID639728703 
Productphosphoglycerate mutase 
Protein accessionYP_871711 
Protein GI117922519 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATATT CTAATGCCGC AGAAAATGCT AGTTTGAGAA ACAAAATGCC AAACTGTATA 
AAACCTATGA ACATAGTGGT AGTTGGAATG GGCTATGTTG GCCTATCGAA CGCGGTTTTA
CTCGCCCAGC AAAACCATGT AGTAGCGATT GATTTGATGC CCGAGCGCAT CGCGTTAGTT
AATGCGCGTA AACCAACGGT CGCCGACAGT CTGATTGAAG AATACCTGCA GCATAAAGCC
TTAAATCTCA GTGCCACGAG CGACAAAAAC GTCGTTAAAG AAGCCGATTT TGTCATCATA
GCCACTCCTA CGGATTACGA CCCACAAACC AACTACTTTA ATACTCAGTC GGTCGAACGG
GTGGCGAAGG AAGTGCTCGC CCTGAATCCT GACACCACCA TTGTCATCAA ATCGACTGTG
CCAGTGGGTT TTACCGAAGG GCTGAGAAGT AAACTCAACA GTGACAATAT CTTATTTTCG
CCTGAGTTTT TGCGCGAAGG TAAGGCGCTT TACGATAACC TGCACCCCTC GCGGATCATA
GTGGGTGAAC GTTCCGAGCG CGCCCAAGCC TTTGCCGATC TGCTTGCTCG CGCCGCCATT
AAACAAGATA TTCCGATTTT ACTCACAGAC AGCACTGAGG CAGAGGCGAT TAAGTTGTTT
GCCAACACCT TTTTAGCCAT GCGCGTCGCC TACTTTAATG AGTTGGACAC CTATGCGGAG
AGTCGAGGGC TCAACACCCG CCAGATTATC GAAGGCGTAT GTTTAGATCC GCGCATCGGC
GATTACTATA ACAATCCTTC CTTCGGTTAT GGCGGTTACT GCCTGCCCAA GGACACTAAG
CAATTGCTGG CCAACTATAA CGATGTGCCT AACAATCTCA TCAGCGCCAT TGTCGATTCC
AACACGACCC GCAAAGATTT TATCGCCAAC GCGATTATCA GTAAGCAACC GAAGCGAGTG
GGGATCTATC GCTTAATCAT GAAATCCGAC TCAGACAACT TCCGCGCCTC GGCGGTACAA
GGAGTGATGA AACGCATAAA GGCCAAGGGC ATCGAAGTCG TGGTCTATGA GCCCGTACTC
AAGGAAGGGG AGTTTTTTAA CTCGAAAGTG ATCCGCGATT TACATGAATT TAAAGCCATG
TGCGATGTAA TTATTTCTAA CCGTATGGCC AATGAACTCG AAGATGTCGC CGCTAAGGTG
TACACCCGGG ATCTGTTTCA TCACGACTAA
 
Protein sequence
MTYSNAAENA SLRNKMPNCI KPMNIVVVGM GYVGLSNAVL LAQQNHVVAI DLMPERIALV 
NARKPTVADS LIEEYLQHKA LNLSATSDKN VVKEADFVII ATPTDYDPQT NYFNTQSVER
VAKEVLALNP DTTIVIKSTV PVGFTEGLRS KLNSDNILFS PEFLREGKAL YDNLHPSRII
VGERSERAQA FADLLARAAI KQDIPILLTD STEAEAIKLF ANTFLAMRVA YFNELDTYAE
SRGLNTRQII EGVCLDPRIG DYYNNPSFGY GGYCLPKDTK QLLANYNDVP NNLISAIVDS
NTTRKDFIAN AIISKQPKRV GIYRLIMKSD SDNFRASAVQ GVMKRIKAKG IEVVVYEPVL
KEGEFFNSKV IRDLHEFKAM CDVIISNRMA NELEDVAAKV YTRDLFHHD