Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4076 |
Symbol | |
ID | 4480290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4898745 |
End bp | 4900127 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639728691 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_871699 |
Protein GI | 117922507 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.311151 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGA TAGATAATAA CCTCAAGCCC CTTCCTTCCG CTGTGTCTGT CCTGATCGTC GATGACGAGC CCGGGATGCG TAGCTTTTTG AATAAGGCGC TCTCGAAAAA ATTCGCCTTA GTCGAAACGG CGGGCAGTAT TGAAGATGCT GAGCAGTTAC GTAGTCGCTG CCACTTCGAC CTATTGATTG TCGATATCCG TTTACCGGGT CGCTCGGGCA TCGAGTGGCA CGAAGCCTTA GATGAACAAG GCCGCCGATC TGATGTGATT TTTATGACTG GCTATGCGGA TTTAGAAGTC GCGATTAAGG CGCTGCGGGC TGGTGCCTCA GACTTTATTA TGAAGCCCTT CCACCTCGAG CAGATGATGT CGGCGGTTGA CCGTTGTATT GAACGCCGTT TGCTGCGCCG CGAAAACTTA ATGCTGCGCC GTGAAGTCTC CATTGGCTAT TCCTCCACCA TTATAGGTAG CAGCGAGGCC ATGAAGTCGG TCAAGCAAGT GATTGAGCGC GTGGCACCAA CCAATGCCGT GGTGTTAATT CAAGGCGAAT CGGGCACGGG TAAAGAGCTG GTCGCGCGCC AATTACACTT ACTCAGCGGC CGCCAAGGGC CATTTGTACC CGTTAACTGC GGCTCTATCG CCCCCGAACT ACTGGAGAGT GAACTCTTTG GCCATACGGC AGGGGCATTT ACTGGCGCTA AGGGAAATCG CGAAGGCTTA TTCAGTTTTG CCTCCGGCGG CACTATTTTC CTCGATGAAA TTGGTGAGAT GCCCCTCAAG ATGCAGACGG CATTGCTCAG GGTATTAGAG CAAAAGGCGA TTCGCCCCGT CGGCAGTGAG AAGGAAGTCA ATATCGATGT CCGGGTGATT GCGGCCACTA ACCGTACGCT GGTGGATGAA GTCGAGGCGG GTAACTTCCG TCGTGATCTT TATTATCGCT TGAATGTGCT GGATATTTTA ATTCCTCCCC TGCGTGAGCG TCCGGAAGAT GTGGTCGAAT TGACCCATCA CTTTACTCGC CAATTGGCAG CCGAATTGGG TGTGCGCGAA GTCGTGTGGA GCCATGAGGA TATGGTGAAG CTGCAACAGC ACGAGTGGCC AGGCAATATC CGTGAACTGC GCAATATGAT TGAACGCTGC ATTCTGCTTG GCAAGCCGCC AGCGGAATAC TGGAAGCAGC AGGTCAAGAC AGAGTCTTCG GCCTCCCAAG GTTATCCCTT AGATTGGCCG TTGAAAGAAG TGGAAAAACA CCATGTGACC AGCGTGGTGG ATCTGCACTC TGGCAATAAA TCAGCAGCGG CGAGGGACTT AGGCGTTTCC CGTAAGACCT TAGATCGCAA GTATAAAGAG TGGTTTGACG TTAGCGACGA GCAGGAGTTC TAA
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Protein sequence | MSQIDNNLKP LPSAVSVLIV DDEPGMRSFL NKALSKKFAL VETAGSIEDA EQLRSRCHFD LLIVDIRLPG RSGIEWHEAL DEQGRRSDVI FMTGYADLEV AIKALRAGAS DFIMKPFHLE QMMSAVDRCI ERRLLRRENL MLRREVSIGY SSTIIGSSEA MKSVKQVIER VAPTNAVVLI QGESGTGKEL VARQLHLLSG RQGPFVPVNC GSIAPELLES ELFGHTAGAF TGAKGNREGL FSFASGGTIF LDEIGEMPLK MQTALLRVLE QKAIRPVGSE KEVNIDVRVI AATNRTLVDE VEAGNFRRDL YYRLNVLDIL IPPLRERPED VVELTHHFTR QLAAELGVRE VVWSHEDMVK LQQHEWPGNI RELRNMIERC ILLGKPPAEY WKQQVKTESS ASQGYPLDWP LKEVEKHHVT SVVDLHSGNK SAAARDLGVS RKTLDRKYKE WFDVSDEQEF
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