| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4064 |
|---|
| Symbol | |
|---|
| ID | 4480278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 4882861 |
|---|
| End bp | 4884063 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639728679 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_871687 |
|---|
| Protein GI | 117922495 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTCA GTTCGTCTTG TATCAAGTTA TGTCTGTTGA CCAGCTTAGT CGGCACTAGT
TTCCTATGTC TTGCGGCGGA AGCCGAACTT TCCCAAGCGC TGTCGAGCAG CCAAGCTAGG
TTGGCTCATC TCACTTCGTC GAATACCCAA GCGGCAAATT TATCCAGCTC GACCTGGCTC
ACTGGCCTGC CGAGCATTAG CTTAAGTCAC CTCGGGAGTT TGGATAATAG TAACAGCTAC
GAGCAGGAAC TCTCAGTCAA TTTGCCATTT AAATCGCCCG CGCTACACAG CAGCGATAAG
CAAATAAAAC AACTCGCCGA GCAAATTCAT CAACAACAAA CGGCGCTGCA AGGCTTGTAT
CTCTCGGGAT TATTAAGGCA GAGCCTGTGG GATTACCGCC AGAGCGAAGT CAAACTGTCG
CAGCTTGAGC GTAAACAGCA GTTGCTCGAT AAACTCCATC ACCAGCAAAA ACAACTGACC
GATGCGGGGG AACTGCCACT GGCCAACACT CTGCTACTGG AGCGGGAAAG TGTCGATATC
GCCTTAAGCC GCGCCGACAT TCTGCAGCAA CAAGCCCAAT CTTTAGCCCT GTATCAACAG
CTGACGGGTC AAGACCAAAT GCCGAGCGCT ATAGAAGAAA CTGACCGCCC GCTTGGCAAG
GGCGCCGAGA CCTTAGCCCA ACATCCCCTA TGGCAATTGC TAAAGCTGCA ACAACAGCAA
CACCTGCTGC TGATCCAAAC TCAGCAAGCG GGTGAGCGCG ATCCTTGGAC CGTCTCACTC
ACAGCAAAAA ATACCGCGGA TACGGGCGTG GATGATCAGC AGTTAGGCAT AGCCGTGTCA
GTGCCCTTAA CCTTGGGCTC GGCGCTGTCC CAGAGCGATT TATCCCAATG GCAACAAGCG
AATACCGAGC AAAGTCTCAA TCTTGACCGC AGCGCACTCG AGCTTAAAAA CCAGTGGGAT
CAATTAGTCC GCCAACAAAC AAACCTCGTC GAGCAACAGC GCTTACTCAC CCAAGCACTC
GCCCTCAGTC GCACCATTAC CGAGGAACTC GCCAAGGTAA AAGATCAAGA TCAGGTGAGT
TATGAAGTCT GGCTGCGCCG CTATATGGAG GCGCTCGACA CCGAATCCCG CTTGGCGCTC
AACCGCGTCA GCTTGCAACA ACTGCATTCT CAACAACTCC AAGCCTTAGG AATTTCATTA
TGA
|
|---|
| Protein sequence | MSVSSSCIKL CLLTSLVGTS FLCLAAEAEL SQALSSSQAR LAHLTSSNTQ AANLSSSTWL
TGLPSISLSH LGSLDNSNSY EQELSVNLPF KSPALHSSDK QIKQLAEQIH QQQTALQGLY
LSGLLRQSLW DYRQSEVKLS QLERKQQLLD KLHHQQKQLT DAGELPLANT LLLERESVDI
ALSRADILQQ QAQSLALYQQ LTGQDQMPSA IEETDRPLGK GAETLAQHPL WQLLKLQQQQ
HLLLIQTQQA GERDPWTVSL TAKNTADTGV DDQQLGIAVS VPLTLGSALS QSDLSQWQQA
NTEQSLNLDR SALELKNQWD QLVRQQTNLV EQQRLLTQAL ALSRTITEEL AKVKDQDQVS
YEVWLRRYME ALDTESRLAL NRVSLQQLHS QQLQALGISL
|
|---|
| |