Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4042 |
Symbol | |
ID | 4480256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4855811 |
End bp | 4857418 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639728657 |
Product | AbgT putative transporter |
Protein accession | YP_871665 |
Protein GI | 117922473 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2978] Putative p-aminobenzoyl-glutamate transporter |
TIGRFAM ID | [TIGR00819] p-Aminobenzoyl-glutamate transporter family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCGA AATCCAACGA TATTCCCGTC AATTCACCAC AGGCCGACGA CATGAGTTCT CGCGGCTGGT TTGTCCGTTT TCTTAATATT GTCGAACGCT TAGGGAACCT ACTCCCCCAT CCTATTACCT TGTTCGCCCT GTTCTGTGTC GCCGTGATCT TAGTATCTGG CATTGCGGGC TACTTTGGAT TAACGGTCAC CGATCCGCGC CCCGAAGGCG CCCACGGACG TGGCGCCGAT GGACTTATCC ACGTCGTCAG CCTGATGAAT GCCGAAGGCT TGCGGATGAT AGTGTCCAAC TTAGTCACTA ACTTCACCGG CTTTACGCCC CTAGGCACTG TACTGGTCGC CCTGCTGGGT GTGGGCATCG CCGAGCGTTC TGGATTGTTA TCCGCGGCGA TGCGGGCACT CGTTATGGGT GCATCTAAGC GATTGGTGAC GTTAACTATC GTATTTGCCG GCATTATGTC GAACACCGCC GCAGAGCTTG GATATGTAGT ATTAATTCCC ATGGCGGCGA TGATCTTCCA CTCCTTAGGT CGTCATCCAC TGGCGGGCTT GGCCGCGGCA TTTGCCGGGG TATCAGGGGG ATACAGCGCC AACCTATTGC TCGGTACTGT CGATCCGTTG TTATCGGGTA TCACTGAAGC GGCGGCGCGA ATGATCGATC CCGACTACAA CGTCGGCCCC GAGGTTAACT GGTACTTTAT GTTTGTCTCG ACCTTTGTGA TCACTTTCCT CGGCGCCTTT GTGACCGAGA AAATTGTCGA GCCGAAACTG GGCAAATATC AAGGCGATGA TGCCGATGAA ACCGTGCTCC AATCCATGGA CAATGTCACC GAGCTGGAAA AACGCGGCCT CAAGTGGGCG GGATTATCTA TGCTGGTGCT AGCGGTATTC CTTGCGCTGT CCGTCGTGCC AGAGGGTGCG CCACTGCGCG ATCCTAAAAC CGGTCTGGTC TCGGGTTCGC CCTTCCTCAA AGGCATAGTC GCCTTTATCT TTATCTGTTT TGCTATCCCA GGTTTTGTCT ACGGTAAGGT CGTTGGCAGC ATTAAAAACG ATAAAGACGT TATCAATGCC ATGTCGCACA GTATGAGCAC TATGGGACTG TATATCGTAC TGGTGTTCTT TGCGGCGCAA TTTGTGGCCT TCTTTAACTG GAGTAATCTG GGCGCCGTGT TAGCCGTGCT GGGTGCCGAT GCCCTGCAAT CCATTGGCTT AACCGGGCCA ATCCTGTTCC TGTTTTTTAT TATGCTCTGT GGCTTTATCA ACTTGATGCT GGGCAGCGCC TCGGCCCAGT GGGCCATTAC CGCACCGATT TTTGTGCCCA TGCTGATGTT AGTCGGCTAT GCGCCCGAAA CCATTCAAGC GGCCTACCGT ATTGGCGACT CAGTGACTAA CTTAGTCACG CCTATGATGA GTTATTTCGG GCTGATTTTG GCCGTGGCTT GCCGTTACCA AAAAAACCTT GGCATAGGCA CGCTTATCGC CACTATGCTG CCGTACACCT TAGTGTTTTT CGTTGGCTGG ACGGCGTTCT TCTTCCTGTG GGTGTTTGGC TTTGGTCTGC CAGTGGGGCC AGGTGCAGCC ACTTACTACA CGCCTTAA
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Protein sequence | MSSKSNDIPV NSPQADDMSS RGWFVRFLNI VERLGNLLPH PITLFALFCV AVILVSGIAG YFGLTVTDPR PEGAHGRGAD GLIHVVSLMN AEGLRMIVSN LVTNFTGFTP LGTVLVALLG VGIAERSGLL SAAMRALVMG ASKRLVTLTI VFAGIMSNTA AELGYVVLIP MAAMIFHSLG RHPLAGLAAA FAGVSGGYSA NLLLGTVDPL LSGITEAAAR MIDPDYNVGP EVNWYFMFVS TFVITFLGAF VTEKIVEPKL GKYQGDDADE TVLQSMDNVT ELEKRGLKWA GLSMLVLAVF LALSVVPEGA PLRDPKTGLV SGSPFLKGIV AFIFICFAIP GFVYGKVVGS IKNDKDVINA MSHSMSTMGL YIVLVFFAAQ FVAFFNWSNL GAVLAVLGAD ALQSIGLTGP ILFLFFIMLC GFINLMLGSA SAQWAITAPI FVPMLMLVGY APETIQAAYR IGDSVTNLVT PMMSYFGLIL AVACRYQKNL GIGTLIATML PYTLVFFVGW TAFFFLWVFG FGLPVGPGAA TYYTP
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