Gene Shewana3_3993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3993 
Symbol 
ID4480207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4796198 
End bp4796779 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content50% 
IMG OID639728609 
Productcytochrome C oxidase assembly protein 
Protein accessionYP_871617 
Protein GI117922425 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3175] Cytochrome oxidase assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGGCC AACCCCATCA GCCCATCATC AAGTCAAATC GTAAGCTTAT CAGCCTACTG 
GTGTTGGGCT GCCTTGCGAT GTTTGGCTTT GGGTTCGCCT TAGTGCCGCT CTACGATGTA
CTGTGCGAAA AACTGGGCAT TAATGGCAAA ACCTCCAATA CTGCCAGCAG TTATCAGGCG
ATCACTGTGG ATAAGAACCG AGTGGTAACA GTGGAGTTTA TCTCGCAGGT ACAGACGGGC
ATGCCGTGGA AATTTGAGCC ACAAACGAAA CGGCTCGAAG TGCATCCGGG CGAACTCATT
CACACGGCAT TTCTGGCGCA AAACATCTCG AATAGAGCGA CTGTGGGCCA GGCGATTCCC
TCTATTTCGC CTGGACAAGG TGCGGCTTAT TTCAATAAAA CCGAATGTTT TTGTTTTAAC
CAACAACACT TAGCCGCGGC GAGTCGCGCC GAACTTCCGT TGATCTTCTT CGTGGATCCT
CAATTACCCG AGTCTATCCA CACTTTAACC CTCTCTTACA CCCTCTACGA CATTACCGAC
AAGCAGTTAG CGTCTGCCAT AGAGCAAGGA GCTGCAAAAT GA
 
Protein sequence
MQGQPHQPII KSNRKLISLL VLGCLAMFGF GFALVPLYDV LCEKLGINGK TSNTASSYQA 
ITVDKNRVVT VEFISQVQTG MPWKFEPQTK RLEVHPGELI HTAFLAQNIS NRATVGQAIP
SISPGQGAAY FNKTECFCFN QQHLAAASRA ELPLIFFVDP QLPESIHTLT LSYTLYDITD
KQLASAIEQG AAK