Gene Shewana3_3929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3929 
Symbol 
ID4480143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4722110 
End bp4724101 
Gene Length1992 bp 
Protein Length663 aa 
Translation table11 
GC content52% 
IMG OID639728545 
Productenterobactin receptor protein 
Protein accessionYP_871553 
Protein GI117922361 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4771] Outer membrane receptor for ferrienterochelin and colicins 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.881798 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTTAC GTCGTAAAAA GATCCTCGCA CAGCTAGTTT CTGCCGCATT ATTGCTACCC 
GCCACTCAGG TTTTGGCGGA TGCCGCACCC GATCAAGACA AGATGATGGA AAGAATCGTT
GTTACCGCAT CGGGTTTCGA GCAGCAAGTG CGTGACGCGC CCGCTTCTAT CAGCGTGCTC
ACCCGGGAGG ATCTCGATAC ACGTTTTTAC CGTGACTTAA CCGACGCCAT GTTAGAAGTG
CCCGGCGTGG TGGTGACTGG CGGTGCTGAC CGTCGGGACA TTAGTTTGCG GGGCATGGGC
AGCCAATACA CGCTGATCCT CGTCGATGGT AAACGTCAGT CTTCCCGCGA GACCCGCACC
AACAGCGACG GTCCTGGTGT TGAAGGCGCT TGGACGCCGC CGCTCGCCGC AATCGATAGG
ATTGAAATTG TCCGCGGCCC CATGTCATCC CTTTATGGCT CCGATGCTAT CGGTGGGGTG
ATCAACATTA TCACCCGTAA AGTGCCCAAT GAGTGGCAGG GGGAATTGCG CCTCGACACT
ACGCTGCAGG AAAAGTCGGA CTCAGGTAAT GTGTATCAGG GCAACTTTTT TGTGAACGGT
GGCTTGATTA AAGATCTGCT CGGCGTGCAG TTATACGGCC AATACACTCA ACGTGAAGAA
GATAGTATCT ACGGCGGTTA CCGAGGTCGC GATGCGGATA ATCTCACCGC CAGATTTGCC
CTCACGCCTA ACCAAGACCA TGACATTATG TTAGAAGTCG GCATCGCCAA CCAAGAGTTG
GATAGCACCT TAGGGAAAAC CGTTGCACCA TTGGCACCGG GCGCCAGTTG TGGCCGCAGT
GGTTGCCCAG CTTCGTCGAC AACCGAGTAT GAAAACAGCA CCATTTCCCT ATCGCACACC
GGGCGTTGGG ACTTTGGTAC CTCGGATACT TATATCAAGC ACGAAGTATT TGATAACAAG
TCCCGCAAGA TGAAGATCAA GAATACCGAT GCTCAAACTA GCCTGATCGC CACCTTGGGG
GAAAGCCATA CCACAACCTT TGGCGCGGCC TTCAATAAGC AAGATCTTAC CGATGAAACG
GGCAATCAGG TCAGTGACTT AACCGATATT AGTCGCCGCC AATGGTCGGT GTTCTCAGAG
GATGAATGGC GTATCGTCGA TAATTTTGCC TTAACCTTAG GCCTGCGTTT AGACGATGAT
GAAAACTTTG GCGACCACCT CAGCCCACGG ATTTACGGCG TATGGGGGCT GACCGAGCAC
ACCACCTTAA AAGGCGGTGT GTCGACGGGC TTTAGGGCGC CGAGCCTGAG GCAAACTGTG
CCCGATTGGG GGCAGGTAAG CCGAGGCGGC AATATGTACG GTAACCCGGA TTTACAACCC
GAAACCTCAG TGAACTATGA GCTAGGCATT TACACCGATC TCACTGACTC CATCACCACC
AGTGCAGGCG TGTTCTATAA CGAGTTTGAG GACAAGATCA CCCGTGTCGC TTGCCCTGCG
ACTCAATGTA CCGATGGGCC TAATCAGTTT GGCTCTGACC CGACCACCTA TGTGAATATT
GATGAGGCGG TCACCCAGGG GGTTGAGTTC AGTATCGACT ATAAAATCTT GAGCAACTTG
GCATTAACGG GCAACTACAC TTATACCGAC TCGGAGCAGA AGACGGGCGC ATATAAAGGT
AGTCCATTGA ATCAATTGCC TAAACATCTG GTGCAATTGT CGGTTAACTA TGAGCCGATA
GATAAGTTAA GCACTTGGCT GCGGGTTAAC TATCGTGGTG AAGAGAGTCA GCCGACAACG
GGTCCTTCTT CAAGCAGCTT GATTGCGCCT TCCTATACGC TGTTAGATTT AGGGGCCAAC
TATCGCGTTA ATGACAGCAT TAAGTTCAGC GCGGGTATTT ATAACGCCTT CGATAAGGAC
ATCACGGAAG AAGAGTACGG TTATATCGAA GACGGCCGTC GTTACTGGTT AGGCATGACC
TATAGCTTTT AA
 
Protein sequence
MLLRRKKILA QLVSAALLLP ATQVLADAAP DQDKMMERIV VTASGFEQQV RDAPASISVL 
TREDLDTRFY RDLTDAMLEV PGVVVTGGAD RRDISLRGMG SQYTLILVDG KRQSSRETRT
NSDGPGVEGA WTPPLAAIDR IEIVRGPMSS LYGSDAIGGV INIITRKVPN EWQGELRLDT
TLQEKSDSGN VYQGNFFVNG GLIKDLLGVQ LYGQYTQREE DSIYGGYRGR DADNLTARFA
LTPNQDHDIM LEVGIANQEL DSTLGKTVAP LAPGASCGRS GCPASSTTEY ENSTISLSHT
GRWDFGTSDT YIKHEVFDNK SRKMKIKNTD AQTSLIATLG ESHTTTFGAA FNKQDLTDET
GNQVSDLTDI SRRQWSVFSE DEWRIVDNFA LTLGLRLDDD ENFGDHLSPR IYGVWGLTEH
TTLKGGVSTG FRAPSLRQTV PDWGQVSRGG NMYGNPDLQP ETSVNYELGI YTDLTDSITT
SAGVFYNEFE DKITRVACPA TQCTDGPNQF GSDPTTYVNI DEAVTQGVEF SIDYKILSNL
ALTGNYTYTD SEQKTGAYKG SPLNQLPKHL VQLSVNYEPI DKLSTWLRVN YRGEESQPTT
GPSSSSLIAP SYTLLDLGAN YRVNDSIKFS AGIYNAFDKD ITEEEYGYIE DGRRYWLGMT
YSF