Gene Shewana3_3906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3906 
Symbol 
ID4480117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4687214 
End bp4689883 
Gene Length2670 bp 
Protein Length889 aa 
Translation table11 
GC content51% 
IMG OID639728519 
Productphosphoenolpyruvate carboxylase 
Protein accessionYP_871530 
Protein GI117922338 
COG category[C] Energy production and conversion 
COG ID[COG2352] Phosphoenolpyruvate carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGTA ATGTGGCAGA CAATGTGACC GACATGTATG CGTCGTTAAG ATCGAACGTG 
AGTATGTTAG GGCAGATCCT GGGCGATACA ATGCGCACCC ACCTCGGTGA TTCTTTCCTC
GAGAAGGTTG AGCAAATTCG TAAACTCGCG AAAGATTCCC GCCGTGGCGA TGAAGCGGCA
CGGGAGCAAA TGCTAGAACT GCTCACCGCA CTCCCCGATG AAGAGTTAGT GCCGTTTGCC
AAAGCCTTCA ACCAATTCCT CAACTTAGCA AACTTATCCG AACAATTTCA TACTATTAGC
CGTAACTGCG ATGAACTGGT TTGCGTACCG GATCCGGTCG AACAGTTGCT TGGCCGCATG
CTAAATAGCC GTATCGATCA AACCAAGATG TTGGATTGCT TAAAGACGCT GGATATCGAC
TTAGTCCTCA CCGCGCATCC AACGGAAATC TCTCGCCGCA CACTGATCCA AAAATATGCT
GCGATTGTGG ATTGCCTCGC CGAGCAAGAA AACAATCAAC TGTCCGACAG AGAGCGCCGC
CAAATTAACC TGCGTCTACG CCAATTAATC GCCCAAATCT GGCACACCAA TGAAATTCGC
CGTGAACGCC CAACACCAGT GGATGAAGCC CGCTGGGGAT TGTCCACCAT TGAAGAATCT
CTCTGGCATG CTGTTCCCGA CTTTTTAAGG CAGCTCAACG ATCAAGTACA AGATCGCACT
GGCCAGCAAT TGCCTATCGA TATCGCGCCA GTACGCTTCT CAAGCTGGAT GGGTGGCGAT
CGCGACGGCA ACCCCTTTGT GACCGCTAAA GTCACCCAAG AAGTGCTAGA TCGTAATCGC
CATGCCGCCG CCCGTTTATT CCTCAAGGAT ATAGTGTTGC TGGTTGGCGA GTTATCGATG
GAAGAAGCCA ACAGCGAGCT GATGGCGTAT ACCAACAATA GCTGCGAACC CTATCGTTTT
GTGCTGCGCT CATTAAGGCA AAAACTGCGC GACACCATCG ACTACTTAAA CGCCCGCATC
GAGGGCCACA ATCCTGAAGT GGATAAATCG ACGCTGATTT GGCAAGAAAG CGATCTGAAA
GCGCCACTAG AAATGCTGTA TAAGAGTTTA TGTGACTGCG GCATGCGTTT GATTGCTAAC
GGTTTACTGC TCGATATCCT GCGCCGACTC GCTTGTTTTG GCATCCATAT GTTAAGGCTC
GACATCCGCC AAGACGCAGG CCGTCACTGC GATGTCCTTG CAGAGTTAAC CCGCTATCTA
GGTATGGGAG ACTTTAATCA TTGGGATGAA ACCGAAAAAC AAGCCTTCTT ACTGCGTGAA
CTCAGTAACC GTCGTCCGCT GATCCCGAGC AACTGGCAAC CTTCCGCCGA CGTAGCCGAA
GTGCTTAACA CTTGCCGCTT AATTGCTAAA CATCCTGCTA AGGCCTTGGG TTCCTATGTG
ATCTCCATGG CGAGCAAACC TTCAGATGTA TTAACCGTAT TATTGCTGCT CAAAGAAACC
GGCTGCACTC ATCCAATGCG CGTTGTGCCG CTATTTGAAA CCTTAAGCGA CTTAAATAAT
GCCGCCGAGT GTATTACCGC ACTGCTCGAT ATCGACTGGT ATCGTGGTTA CACCAAAGGT
ATGCAAGAGG TGATGATCGG TTATTCTGAC TCGGCCAAAG ACGCGGGTGT GATGGCCGCC
GCTTGGGCAC AATACCGTGC ACAGGAACAG TTAGTCGCCG TCTGTAAACA GGCTGGCGTT
AAGCTGACGC TGTTCCATGG TCGTGGTGGC AGTATTGGTC GCGGCGGCGG CCCAGCTCAC
AAAGCGATTC TGTCACAACC ACCCGGCTCA GTTGATGGTC GTATTCGCGT CACCGAGCAA
GGAGAGATGA TCCGCTTTAA GTTCGGCCTG CCTAAATTGG CGGTGCAAAG CTTAGCCCTG
TACACCTCAG CGGTGTTAGA AGCGACCTTG CTTCCGCCGC CCGAGCCTAA GCAGGAATGG
CGCAATTGTA TGGAGCGAAT TGCTGAGGAG TCAGTGAGTG CTTACCGCGG TATTGTCCGT
GAAGAGCCTG ATTTTGTGCC TTATTTCCGT GCAGCCACTC CGGAAGTTGA ACTGGGCAAA
CTACCATTAG GCAGTCGTCC AGCAAAACGC CGTGTCGATG GCGGTATCGA GAGCTTACGT
GCCATTCCTT GGATTTTTGC TTGGTCACAA AACCGCTTAA TGTTGCCAGC ATGGCTCGGC
GCCGGTGAAG CATTACAGGC TGCCTGCCAA CGTGGCGAAA TGGGCTTACT ACAGGATATG
GAGCGCGAAT GGCCCTTCTT TAGCACACGG ATTTCCATGC TGGAGATGGT GTACGCCAAG
GCGGAACCTA ATTTGGCGCG TTACTATGAA ACCTGCTTAG TACCGACCAA TCTACATCAC
TTAGGCGAAA CTTTACGCCA GCGTTTAGAT CTCGGCATTA AAGTGGTGCT GGAGCTGACT
AAATCGGATA CCTTAATGGC GCATACACCG TGGAATCGCG AATCAGTCAA ACTGCGCAAT
CCCTATATCG ATCCATTAAA CTTCCTGCAG ACCGAGTTAT TAGCTCGTAC TCGCAAGGAA
ACAACCGAAG CTCCCGCTTC CGAACACGTG CAACTCGCCT TAATGCTGAC GATTGCCGGT
GTCGCGGCGG GCATGAGAAA CACAGGTTAA
 
Protein sequence
MAGNVADNVT DMYASLRSNV SMLGQILGDT MRTHLGDSFL EKVEQIRKLA KDSRRGDEAA 
REQMLELLTA LPDEELVPFA KAFNQFLNLA NLSEQFHTIS RNCDELVCVP DPVEQLLGRM
LNSRIDQTKM LDCLKTLDID LVLTAHPTEI SRRTLIQKYA AIVDCLAEQE NNQLSDRERR
QINLRLRQLI AQIWHTNEIR RERPTPVDEA RWGLSTIEES LWHAVPDFLR QLNDQVQDRT
GQQLPIDIAP VRFSSWMGGD RDGNPFVTAK VTQEVLDRNR HAAARLFLKD IVLLVGELSM
EEANSELMAY TNNSCEPYRF VLRSLRQKLR DTIDYLNARI EGHNPEVDKS TLIWQESDLK
APLEMLYKSL CDCGMRLIAN GLLLDILRRL ACFGIHMLRL DIRQDAGRHC DVLAELTRYL
GMGDFNHWDE TEKQAFLLRE LSNRRPLIPS NWQPSADVAE VLNTCRLIAK HPAKALGSYV
ISMASKPSDV LTVLLLLKET GCTHPMRVVP LFETLSDLNN AAECITALLD IDWYRGYTKG
MQEVMIGYSD SAKDAGVMAA AWAQYRAQEQ LVAVCKQAGV KLTLFHGRGG SIGRGGGPAH
KAILSQPPGS VDGRIRVTEQ GEMIRFKFGL PKLAVQSLAL YTSAVLEATL LPPPEPKQEW
RNCMERIAEE SVSAYRGIVR EEPDFVPYFR AATPEVELGK LPLGSRPAKR RVDGGIESLR
AIPWIFAWSQ NRLMLPAWLG AGEALQAACQ RGEMGLLQDM EREWPFFSTR ISMLEMVYAK
AEPNLARYYE TCLVPTNLHH LGETLRQRLD LGIKVVLELT KSDTLMAHTP WNRESVKLRN
PYIDPLNFLQ TELLARTRKE TTEAPASEHV QLALMLTIAG VAAGMRNTG