Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3906 |
Symbol | |
ID | 4480117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4687214 |
End bp | 4689883 |
Gene Length | 2670 bp |
Protein Length | 889 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639728519 |
Product | phosphoenolpyruvate carboxylase |
Protein accession | YP_871530 |
Protein GI | 117922338 |
COG category | [C] Energy production and conversion |
COG ID | [COG2352] Phosphoenolpyruvate carboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGTA ATGTGGCAGA CAATGTGACC GACATGTATG CGTCGTTAAG ATCGAACGTG AGTATGTTAG GGCAGATCCT GGGCGATACA ATGCGCACCC ACCTCGGTGA TTCTTTCCTC GAGAAGGTTG AGCAAATTCG TAAACTCGCG AAAGATTCCC GCCGTGGCGA TGAAGCGGCA CGGGAGCAAA TGCTAGAACT GCTCACCGCA CTCCCCGATG AAGAGTTAGT GCCGTTTGCC AAAGCCTTCA ACCAATTCCT CAACTTAGCA AACTTATCCG AACAATTTCA TACTATTAGC CGTAACTGCG ATGAACTGGT TTGCGTACCG GATCCGGTCG AACAGTTGCT TGGCCGCATG CTAAATAGCC GTATCGATCA AACCAAGATG TTGGATTGCT TAAAGACGCT GGATATCGAC TTAGTCCTCA CCGCGCATCC AACGGAAATC TCTCGCCGCA CACTGATCCA AAAATATGCT GCGATTGTGG ATTGCCTCGC CGAGCAAGAA AACAATCAAC TGTCCGACAG AGAGCGCCGC CAAATTAACC TGCGTCTACG CCAATTAATC GCCCAAATCT GGCACACCAA TGAAATTCGC CGTGAACGCC CAACACCAGT GGATGAAGCC CGCTGGGGAT TGTCCACCAT TGAAGAATCT CTCTGGCATG CTGTTCCCGA CTTTTTAAGG CAGCTCAACG ATCAAGTACA AGATCGCACT GGCCAGCAAT TGCCTATCGA TATCGCGCCA GTACGCTTCT CAAGCTGGAT GGGTGGCGAT CGCGACGGCA ACCCCTTTGT GACCGCTAAA GTCACCCAAG AAGTGCTAGA TCGTAATCGC CATGCCGCCG CCCGTTTATT CCTCAAGGAT ATAGTGTTGC TGGTTGGCGA GTTATCGATG GAAGAAGCCA ACAGCGAGCT GATGGCGTAT ACCAACAATA GCTGCGAACC CTATCGTTTT GTGCTGCGCT CATTAAGGCA AAAACTGCGC GACACCATCG ACTACTTAAA CGCCCGCATC GAGGGCCACA ATCCTGAAGT GGATAAATCG ACGCTGATTT GGCAAGAAAG CGATCTGAAA GCGCCACTAG AAATGCTGTA TAAGAGTTTA TGTGACTGCG GCATGCGTTT GATTGCTAAC GGTTTACTGC TCGATATCCT GCGCCGACTC GCTTGTTTTG GCATCCATAT GTTAAGGCTC GACATCCGCC AAGACGCAGG CCGTCACTGC GATGTCCTTG CAGAGTTAAC CCGCTATCTA GGTATGGGAG ACTTTAATCA TTGGGATGAA ACCGAAAAAC AAGCCTTCTT ACTGCGTGAA CTCAGTAACC GTCGTCCGCT GATCCCGAGC AACTGGCAAC CTTCCGCCGA CGTAGCCGAA GTGCTTAACA CTTGCCGCTT AATTGCTAAA CATCCTGCTA AGGCCTTGGG TTCCTATGTG ATCTCCATGG CGAGCAAACC TTCAGATGTA TTAACCGTAT TATTGCTGCT CAAAGAAACC GGCTGCACTC ATCCAATGCG CGTTGTGCCG CTATTTGAAA CCTTAAGCGA CTTAAATAAT GCCGCCGAGT GTATTACCGC ACTGCTCGAT ATCGACTGGT ATCGTGGTTA CACCAAAGGT ATGCAAGAGG TGATGATCGG TTATTCTGAC TCGGCCAAAG ACGCGGGTGT GATGGCCGCC GCTTGGGCAC AATACCGTGC ACAGGAACAG TTAGTCGCCG TCTGTAAACA GGCTGGCGTT AAGCTGACGC TGTTCCATGG TCGTGGTGGC AGTATTGGTC GCGGCGGCGG CCCAGCTCAC AAAGCGATTC TGTCACAACC ACCCGGCTCA GTTGATGGTC GTATTCGCGT CACCGAGCAA GGAGAGATGA TCCGCTTTAA GTTCGGCCTG CCTAAATTGG CGGTGCAAAG CTTAGCCCTG TACACCTCAG CGGTGTTAGA AGCGACCTTG CTTCCGCCGC CCGAGCCTAA GCAGGAATGG CGCAATTGTA TGGAGCGAAT TGCTGAGGAG TCAGTGAGTG CTTACCGCGG TATTGTCCGT GAAGAGCCTG ATTTTGTGCC TTATTTCCGT GCAGCCACTC CGGAAGTTGA ACTGGGCAAA CTACCATTAG GCAGTCGTCC AGCAAAACGC CGTGTCGATG GCGGTATCGA GAGCTTACGT GCCATTCCTT GGATTTTTGC TTGGTCACAA AACCGCTTAA TGTTGCCAGC ATGGCTCGGC GCCGGTGAAG CATTACAGGC TGCCTGCCAA CGTGGCGAAA TGGGCTTACT ACAGGATATG GAGCGCGAAT GGCCCTTCTT TAGCACACGG ATTTCCATGC TGGAGATGGT GTACGCCAAG GCGGAACCTA ATTTGGCGCG TTACTATGAA ACCTGCTTAG TACCGACCAA TCTACATCAC TTAGGCGAAA CTTTACGCCA GCGTTTAGAT CTCGGCATTA AAGTGGTGCT GGAGCTGACT AAATCGGATA CCTTAATGGC GCATACACCG TGGAATCGCG AATCAGTCAA ACTGCGCAAT CCCTATATCG ATCCATTAAA CTTCCTGCAG ACCGAGTTAT TAGCTCGTAC TCGCAAGGAA ACAACCGAAG CTCCCGCTTC CGAACACGTG CAACTCGCCT TAATGCTGAC GATTGCCGGT GTCGCGGCGG GCATGAGAAA CACAGGTTAA
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Protein sequence | MAGNVADNVT DMYASLRSNV SMLGQILGDT MRTHLGDSFL EKVEQIRKLA KDSRRGDEAA REQMLELLTA LPDEELVPFA KAFNQFLNLA NLSEQFHTIS RNCDELVCVP DPVEQLLGRM LNSRIDQTKM LDCLKTLDID LVLTAHPTEI SRRTLIQKYA AIVDCLAEQE NNQLSDRERR QINLRLRQLI AQIWHTNEIR RERPTPVDEA RWGLSTIEES LWHAVPDFLR QLNDQVQDRT GQQLPIDIAP VRFSSWMGGD RDGNPFVTAK VTQEVLDRNR HAAARLFLKD IVLLVGELSM EEANSELMAY TNNSCEPYRF VLRSLRQKLR DTIDYLNARI EGHNPEVDKS TLIWQESDLK APLEMLYKSL CDCGMRLIAN GLLLDILRRL ACFGIHMLRL DIRQDAGRHC DVLAELTRYL GMGDFNHWDE TEKQAFLLRE LSNRRPLIPS NWQPSADVAE VLNTCRLIAK HPAKALGSYV ISMASKPSDV LTVLLLLKET GCTHPMRVVP LFETLSDLNN AAECITALLD IDWYRGYTKG MQEVMIGYSD SAKDAGVMAA AWAQYRAQEQ LVAVCKQAGV KLTLFHGRGG SIGRGGGPAH KAILSQPPGS VDGRIRVTEQ GEMIRFKFGL PKLAVQSLAL YTSAVLEATL LPPPEPKQEW RNCMERIAEE SVSAYRGIVR EEPDFVPYFR AATPEVELGK LPLGSRPAKR RVDGGIESLR AIPWIFAWSQ NRLMLPAWLG AGEALQAACQ RGEMGLLQDM EREWPFFSTR ISMLEMVYAK AEPNLARYYE TCLVPTNLHH LGETLRQRLD LGIKVVLELT KSDTLMAHTP WNRESVKLRN PYIDPLNFLQ TELLARTRKE TTEAPASEHV QLALMLTIAG VAAGMRNTG
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