Gene Shewana3_3891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3891 
Symbol 
ID4480102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4669304 
End bp4670143 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content47% 
IMG OID639728504 
ProductDNA adenine methylase 
Protein accessionYP_871515 
Protein GI117922323 
COG category[L] Replication, recombination and repair 
COG ID[COG0338] Site-specific DNA methylase 
TIGRFAM ID[TIGR00571] DNA adenine methylase (dam) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.728671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAA AACATAGAGC CTTCCTGAAA TGGGCCGGCG GAAAATTTAA ATTGGTGGAT 
GAGCTCGCGA ACTACTTACC AACAGGTGAG CGTTTAGTTG AGCCCTTTGT CGGCGCAGGT
TCAGTCTTTT TAAATACTGA CTATCCCAGC TATTTACTCT GCGACATCAA TCAAGATCTG
ATCAATCTCT ACAACATAGT GAAAGAAAGG CCTGCCGAGT ACATTGCGGC GGCCAAGAAG
CTATTCGTCG ATGAGATGAA TCAAAAGGAT GCCTACTACC GTGTGCGTAC AGACTTTAAT
AAATCTCGCG ATCCTTTTTT GCGCTCGGTT TATTTTCTGT ACTTGAATCG CCATGGTTTT
AATGGTCTGT GCCGTTATAA CCGCAAAGGG GGCTTTAATG TGCCTTTTGG CTCCTACAAA
AAGCCTTATT TCCCAGAGAA GGAAATCTTA GCATTTTCAA AGAAAGCGCA GCGCGCCGAG
TTTAAGTGCA TCGGCTATGA AAAAGCCTTC GAGCAAATCC GCACTGGCGA TGTGATCTAT
TGCGATCCGC CCTATGCGCC GCTATCGACC ACCGCGAGTT TCACCACTTA TGTTGGTGCG
GGTTTTAGTT TGGATGATCA GGCGCTGCTG GCGCGTTACT CGCGGCATAT GGCCTTAGAG
CAGCGCATTC CTGTTGTGAT CAGTAACCAT GATATTCCGC TGACACGTGA GTTGTATCGC
GGTGCCCACC TTGCCAAGAT CCAAGTGCAA CGCAACATTA GTCAAAATGG CAGTGGTCGC
AATAAAGTCG ACGAGCTGAT TGCGTTGTAC GACGAGAATT ATGACCCGCA GGATGATTGA
 
Protein sequence
MIKKHRAFLK WAGGKFKLVD ELANYLPTGE RLVEPFVGAG SVFLNTDYPS YLLCDINQDL 
INLYNIVKER PAEYIAAAKK LFVDEMNQKD AYYRVRTDFN KSRDPFLRSV YFLYLNRHGF
NGLCRYNRKG GFNVPFGSYK KPYFPEKEIL AFSKKAQRAE FKCIGYEKAF EQIRTGDVIY
CDPPYAPLST TASFTTYVGA GFSLDDQALL ARYSRHMALE QRIPVVISNH DIPLTRELYR
GAHLAKIQVQ RNISQNGSGR NKVDELIALY DENYDPQDD