Gene Shewana3_3884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3884 
Symbol 
ID4480095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4663784 
End bp4664704 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content47% 
IMG OID639728497 
Producthypothetical protein 
Protein accessionYP_871508 
Protein GI117922316 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.288513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGCC CTGTAGTTAT CGGTTTGATT TTATTGATAG TGGGTAATCT ATTTAGTGCT 
TTTTACGATG TATCGATCAA ATGGTTGCCA GAAGATGCGA ATGCGGCCAC TTTTCTACTC
GTGAGACAAA TCACTTCAGT ATTGATGTTA CTCCCCATTT GGTTGTACTC GCAGCGACCC
AAGACGGAAC ATATTTCGGT CCACCTTTGG CGTGCCAACA TAGGCTCGGT TGGCGCGCTT
TTTTTAATTA TTGGCCTAAT GGCTTTGCCT TTAGCGACGG TTAGCTCCCT GTTTTACTCG
GCGCCGCTGA TGATTATTCT GATGGGCTAT TGGTTTTTAA AGGAGCGGAT CACCACTGGG
CAAGTGGCAT GCACATTACT CGGGTTCGTC GGGATCTTAA TTATCCTGAG GCCAAGTGAA
ATGAACTGGT TTGGATTGGC TGTGTTATTT TCGGCATTTA CCTTTGCCGT CAATCAGTTG
ACCCTGAAAA AAGTCCCTAA CACTGAGCAT CCAGTATTAA CCTTAATGTT GTATAACCTG
CTGGGTATTC CTGCAACCTT AATCATTGCG GCATTTCAGG GGCTTGAGGG CCTGAGTTGG
GGATTGTTAG CCGTAGCGCT ACTCAGTAAT GCCTTCTTGC TGATTTATCA CTGGTTCTGC
GTGCTGGCCT ATCGCCGCGC ACAGGCGAGC GATATTGCGA TTGCTGAATA TACAGGCCTG
TTATTTGTTG TCTTCTTAGG CTGGCTGTTA TTCGATGAAT GGTTAGATAG CTTAAGTTGG
CTGGGCGCCG CATTGATTGT GTTGCCGTCA CTGTTTTTAC CTTGGATTGG CATGTGGATG
GCCAAGTCAC CCAAGGTGAT GGATAACATC CAAGTAAAAG CATTAGGACT GGAAGCGGTA
GAAGGCGAGC CTAAACCCTA A
 
Protein sequence
MQRPVVIGLI LLIVGNLFSA FYDVSIKWLP EDANAATFLL VRQITSVLML LPIWLYSQRP 
KTEHISVHLW RANIGSVGAL FLIIGLMALP LATVSSLFYS APLMIILMGY WFLKERITTG
QVACTLLGFV GILIILRPSE MNWFGLAVLF SAFTFAVNQL TLKKVPNTEH PVLTLMLYNL
LGIPATLIIA AFQGLEGLSW GLLAVALLSN AFLLIYHWFC VLAYRRAQAS DIAIAEYTGL
LFVVFLGWLL FDEWLDSLSW LGAALIVLPS LFLPWIGMWM AKSPKVMDNI QVKALGLEAV
EGEPKP