Gene Shewana3_3881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3881 
Symbol 
ID4480092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4662176 
End bp4662502 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content50% 
IMG OID639728494 
Producthypothetical protein 
Protein accessionYP_871505 
Protein GI117922313 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID[TIGR00252] conserved hypothetical protein TIGR00252 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.114446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTCG GACAGCAGGC AGAGTCGCTC GCTCAAGGTT ACCTCGAACA GCAAGGGTTA 
ACCTTTGTCG CGCGCAATGT CCGCTATCCC TTTGGTGAAA TAGACCTCGT CATGCGCCAT
AAACACCACT GGGTATTTGT TGAAGTAAAA TATCGCTCAG CAAATCAATT TGGCGGTGCA
ATACAAGCAC TTAGCAAAGC ACAAATCGGC AGGATCCGCA TGGCGGCCAG CCATTATTTA
CAGACGCATA AACTGGATGT GCCGTGCCGA TTCGACGTTG TCGCCATCGA GGACGCGCAA
ATCCACTGGC TAGTCGATGC CTTTTAA
 
Protein sequence
MTLGQQAESL AQGYLEQQGL TFVARNVRYP FGEIDLVMRH KHHWVFVEVK YRSANQFGGA 
IQALSKAQIG RIRMAASHYL QTHKLDVPCR FDVVAIEDAQ IHWLVDAF