| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3872 |
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| Symbol | potE |
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| ID | 4480082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4649230 |
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| End bp | 4650549 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639728485 |
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| Product | putrescine transporter |
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| Protein accession | YP_871496 |
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| Protein GI | 117922304 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0414158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAT CAGCAAATAA AATTGGTGTC GTCCAATTAA CTATTATCAC CATAGTCAAC
ATGATGGGTT CAGGTATTAT CATGTTGCCA ACCCAATTAG CCCAAGTCGG TACTATTTCT
ATCCTTTCTT GGTTAGTCAC GGCGGCGGGT TCTACGGCGC TTGCCTATGC CTTTGCCAAA
TGCGGTATGT TCAGTAAAAA ATCGGGTGGT ATGGGCGGTT ACGCCGAATA TGCCTTCGGT
CGCAGCGGTA ACTTTATGGC GAACTACACC TATGCGGTAT CGCTTTTAAT CGCTAACGTC
GCCATCGCTA TCTCTGCCGT GGGTTATGCC GCGGTGTTAC TCGAAGTGAA CTTAAGCCCA
ATGGCTATCT GTCTTGCCAC CATTGGTGTG CTTTGGTTAG CAACAGTGGC TAACTTTGGT
GGCGCCCGCA TTACGGGTCG CGTGAGTAGC GTCACCGTGT GGGGGATTAT TCTGCCCGTG
ATTGGTGTGT CGTTAATCGG TTGGTTCTGG TTCGACATCG ACCTCTACAA AGGTGCTTGG
AACCCACACG ATATGCCTTT CTTTAAAGCC TTAGGCGGTT CAATCGCGAT GACTTTATGG
GCATTCCTTG GCTTAGAATC AGCTTGTGCT AACTCGGAGA CAGTTGATAA CCCAGAGAAA
AACGTTCCTA TCGCCGTAAT GGGCGGTACC TTAGGTGCAG CGCTTATCTA TATCGTTTCA
ACCAACGTGA TTGCCGGTAT TGTGCCTAAC GCCGACCTTG CCAACTCAAA CGCACCTTTC
GGTCTAGCCT TCGCACAAAT GTTTAACCCT GTGGTCGGTA AAATCGTGAT GGCCTGCGCC
ATTATCTCTT GTACTGGCTC ACTGCTGGGT TGGCAGTTCA CTATCGCGCA AGTGTTTAAA
GCCTCTGCCG ATGAAGGTTT CTTCCCTAAA GTGTTCTCTA AGGTCAGTAA AGCCGATGCA
CCAATTTGGG GTATGACCAT CATCGTTTCG ATTCAAACCC TGCTGTCTCT GATGACTATT
AGCCCATCAC TGAGCAAACA GTTTGAAGCC CTGGTTAACC TCGCCGTGGT GACTAACATT
GTGCCTTACA TCCTGTCGAT GGCAGCCCTA GGTGTGATGC AAAAACAACT CAAAGTACCA
GCGAACAAGG CCCGTGTTGC CAACGTGATT GCGGTTATCG GCGCCCTGTA TAGCTTCTAC
GCCCTCTATA GCTCTGGTGA AACCGCAGTG ATGTTAGGTG CTATCGCGAC CTTCTTCGGT
TGGACCATCT ACGGGGTGAT TTCCAATAAA ACACCAACAG CTGAGATCAA AGCAGCGTGA
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| Protein sequence | MSKSANKIGV VQLTIITIVN MMGSGIIMLP TQLAQVGTIS ILSWLVTAAG STALAYAFAK
CGMFSKKSGG MGGYAEYAFG RSGNFMANYT YAVSLLIANV AIAISAVGYA AVLLEVNLSP
MAICLATIGV LWLATVANFG GARITGRVSS VTVWGIILPV IGVSLIGWFW FDIDLYKGAW
NPHDMPFFKA LGGSIAMTLW AFLGLESACA NSETVDNPEK NVPIAVMGGT LGAALIYIVS
TNVIAGIVPN ADLANSNAPF GLAFAQMFNP VVGKIVMACA IISCTGSLLG WQFTIAQVFK
ASADEGFFPK VFSKVSKADA PIWGMTIIVS IQTLLSLMTI SPSLSKQFEA LVNLAVVTNI
VPYILSMAAL GVMQKQLKVP ANKARVANVI AVIGALYSFY ALYSSGETAV MLGAIATFFG
WTIYGVISNK TPTAEIKAA
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