| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3841 |
|---|
| Symbol | |
|---|
| ID | 4480051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 4611431 |
|---|
| End bp | 4612885 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639728454 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_871465 |
|---|
| Protein GI | 117922273 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0397] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.261021 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTTA AACAGGATTT TTTTACCCAG TTACCTGAGT TTTACGCTCA AGTTTATCCA
CAGGGGATAA GCAATCCTCA TTGGCTGGCG TGGAGTGAAG ATGCCGCCAA GTTAATCGAC
TTACAGCAGC CTACAGATGT CCTATTGAAA GGATTATCGG GTAACGCGGC CGTTGAGGGC
GCAAGTTATT ATGCGCAGGT GTACAGTGGC CATCAGTTTG GTGGCTATAC GCCCAGATTA
GGCGATGGTC GCTCGATTAT TTTGGGTGAG GCATTAGGCC CCCAAGGTGC ATGGGATGTG
GCACTCAAAG GCGGCGGGCC GACGCCCTAT TCTCGCCATG GCGATGGCAG AGCCGTAATG
CGCTCAGCGG TGCGGGAGTT TCTTGTCTCC GAAGCGCTGC ATCATTTAGG CGTGCCGACG
ACCCGAGCCT TGGCGGTGAT CGGCTCTGAT ATGCCCGTCT GGCGTGAGAG CCAAGAAACC
GCAGCCATTA CCGTACGTTT GGCACGTAGC CATATCCGTT TCGGTCATTT CGAATTTTTC
TGCCATAGCG AGCGTGGTCA AGCCGATAAG CTCACGCAGT TACTCAACTT TACCTTGAAG
CAGCATTATC CGCATTTGAG CTGCGATCTG GCGGGCTATA AAGCCTGGTT TTTGCAGGTA
GTACAAGATA CCGCTAAGCT CATCGCCCAT TGGCAGGCTA TCGGCTTTGC CCACGGGGTG
ATGAATACCG ACAATATGTC GATTCTGGGG GATAGTTTCG ATTTTGGCCC GTTTGCCTTC
CTCGATACCT TCCAAGAATA CTTTATTTGC AATCATTCCG ACCCAGAAGG GCGTTACGCC
TTTGGTCAGC AGCCCGGTAT TGGCCTGTGG AACCTGCAAC GTTTAGCGCA GGCGTTGACA
CCTGTGATCC CGTCCGATGA TTTAATTGCC GCCTTGAATC AATATCAACA TGCGCTAGTA
CAGCATTACT TGATGCTGAT GCGCGCTAAG TTAGGGCTGG CTGAGCGAGC GGATTCGACA
GCAGAGCAGG ATCAGCAGGA CTTAGAACTG ATTGGCCGCT TTACCGTGCT GATGGAGAAA
AATCAGCTGG ATTACAGCAA CACCTGGCGC CGCTTCGGTC AGCTTGACCC GAGTAGTGCG
CACTCTTCGC TACGGGATGA TTTTATCGAC CTTAATGAGT TTGATGTTTG GTATCAGGCA
TATCAGGTGC GGTTGGGTAA AGTTACCGAT GTTGAGGCCT GGCAGCAGGC GCGTAATAGC
GTTAATCCCA AATACATCCT ACGCAATTAT TTGGCTCAGG AGGCCATTAT TGCCGTGGAG
GAGGGCAATC TTGCGCCGCT AGAGCGTCTG CACCAAGTGT TGCGCCAGCC GTTTGCCGAG
CAAGTTGAGC ACGAAGATCT GGCCAAGCGT CCACCCGATT GGGGACAAGG GCTGATTATG
TCGTGCAGCA GTTGA
|
|---|
| Protein sequence | MKFKQDFFTQ LPEFYAQVYP QGISNPHWLA WSEDAAKLID LQQPTDVLLK GLSGNAAVEG
ASYYAQVYSG HQFGGYTPRL GDGRSIILGE ALGPQGAWDV ALKGGGPTPY SRHGDGRAVM
RSAVREFLVS EALHHLGVPT TRALAVIGSD MPVWRESQET AAITVRLARS HIRFGHFEFF
CHSERGQADK LTQLLNFTLK QHYPHLSCDL AGYKAWFLQV VQDTAKLIAH WQAIGFAHGV
MNTDNMSILG DSFDFGPFAF LDTFQEYFIC NHSDPEGRYA FGQQPGIGLW NLQRLAQALT
PVIPSDDLIA ALNQYQHALV QHYLMLMRAK LGLAERADST AEQDQQDLEL IGRFTVLMEK
NQLDYSNTWR RFGQLDPSSA HSSLRDDFID LNEFDVWYQA YQVRLGKVTD VEAWQQARNS
VNPKYILRNY LAQEAIIAVE EGNLAPLERL HQVLRQPFAE QVEHEDLAKR PPDWGQGLIM
SCSS
|
|---|
| |