Gene Shewana3_3835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3835 
Symbol 
ID4480045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4606761 
End bp4608266 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content54% 
IMG OID639728448 
ProductNa+/H+ antiporter NhaC 
Protein accessionYP_871459 
Protein GI117922267 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCGA ATCTGCTTGC GATACTTCCC CTGTTATTAA CCCTAGTGTT AGCCCTTTGG 
CTGCGGCGTA CCTTAGTGGC GCTGGGTGTC GGTATCCTCT CGGGCGCGTT AATCATTGCC
CAGTTCGATA TCCTGCAAAG CTTGGGCTAT CTCTTGGAAA TAGGCGCTAA GCAGTTTTAC
AGCCAAGACG CTTGGCAGTG GTGGCATTTA AACGTGCTGA TGGCCATGTT ACTGCTGGGC
AGCATGACGC AGCTCCTTGC CAGAAGCGGT GCGGTCGAGC AATTTGGTGA TTGGCTATAT
CGACGTATTC GCACGGGGCG ACAGGCGCGT ATTGGTGTGG TGCTGTTGGG TTGGTTGGTC
TTTATCGACG GTATTTTTAG TTGCCTCGCT GTGGGGCATG TGTGCCAACC TTTGAGCCAG
CGTTATGGTA TCCGGCAGAC GCAGCTGGCC TATTTAGTCG ACTCTAATGC GTCGCCGCTC
TGTTCACTCT TGCCTTTTTC TAGCTGGGGT CCCTATGTGA TGGCGCTGCT GGCGGGACTC
AGCTTTTTAC CCGTTTCCGC CCTTGAGGCC TTTATCGACG TCGCCTTATC CAATTTTTAT
GCGATAACTA CATTAGGCTT GTCACTGATT GTGGCTTGGT TTGGGATGGG GTTTAGTTCC
ATCGAGAAGG CGCTATTGGC GGCTGAGCCC GTTGAGCCAA GTTTATCGTC TTCAAAGGGC
AATCCTTGGC TGCTTGCGAT CCCTATGCTG ACCTTGCTGG GCGCCTCAGT CGGTTTAACT
CTTTGGTCTG GCGCGCAGCA GGTGCCGTCA TGGGATATTT CGGCTTGGTT AGCCAAGGCC
GATATTGGCG CTGCGATGCG CGATGCTTGT CTGTTATCGA CCTTAGTGAC GCTAGTGTTG
TTGATGTTGT CGGGCCGAAG CATAGGGAAA CTGCTGGGCG ACTTGGCGCA TGGCGTGCGG
ATGATCGCCT TTGCCATCGC GATTTTACTC TGTACTTGGA TGATAGGCGC GGTGATCCAA
GATCTGGGCG TGGCGAGCTT GTTAGCGAGC TGGGCTAAAT TGTATTTATC CCCGAGTTTG
CTGGTGGCGG GGATGTTCCT GCTCTGCGCT ATCATGGCCT TTGCTACTGG CTCAAGCTGG
GGCACCTTCG CGATTATGCT CCCCATCGGC GGGGAAATTG CCCATAACAT GGATGCTAGC
TTGCTGTTGC CGGTATTGAG TGCTGTGATG GCGGGCTCGG TATTTGGCGA TCATTGCTCG
CCGATTTCAG ATACTAGCGT GCTGAGCGCG ACGAGCTCTG GCTGCTTACC CCATGACCAT
GTGGTGACTC AACTGCCCTT TGCATTAATC GGCGCGGGTG CGGCATTAGT GGGATTTCAG
TTAGTCAACT TATCCGTTGC AACCCTATTC GTGTGGTGTG GGGTCATAGG TACGGCACTA
GGGTTATTGG CCTTATTGAC ACGCTTTTAT CCACCTTGGC TGAGCGCTCG TTCGCAGACA
AACTGA
 
Protein sequence
MSPNLLAILP LLLTLVLALW LRRTLVALGV GILSGALIIA QFDILQSLGY LLEIGAKQFY 
SQDAWQWWHL NVLMAMLLLG SMTQLLARSG AVEQFGDWLY RRIRTGRQAR IGVVLLGWLV
FIDGIFSCLA VGHVCQPLSQ RYGIRQTQLA YLVDSNASPL CSLLPFSSWG PYVMALLAGL
SFLPVSALEA FIDVALSNFY AITTLGLSLI VAWFGMGFSS IEKALLAAEP VEPSLSSSKG
NPWLLAIPML TLLGASVGLT LWSGAQQVPS WDISAWLAKA DIGAAMRDAC LLSTLVTLVL
LMLSGRSIGK LLGDLAHGVR MIAFAIAILL CTWMIGAVIQ DLGVASLLAS WAKLYLSPSL
LVAGMFLLCA IMAFATGSSW GTFAIMLPIG GEIAHNMDAS LLLPVLSAVM AGSVFGDHCS
PISDTSVLSA TSSGCLPHDH VVTQLPFALI GAGAALVGFQ LVNLSVATLF VWCGVIGTAL
GLLALLTRFY PPWLSARSQT N