| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3824 |
|---|
| Symbol | |
|---|
| ID | 4480034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 4591449 |
|---|
| End bp | 4592237 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639728437 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_871448 |
|---|
| Protein GI | 117922256 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAGC AAGAGACCAT ATTCCCCACA GATGACACAC AAAGCTCAGT GGCTCATGCT
GCGACGAGCA CAACGAATAA GGTGAAATCC CTCGCCAGCG AAAAATCGTC GACCACCTTA
GCCGATCAAA TTTTGGTGCA AATACAAACC AGCATCATCA AGGGCGAACT GCCTCCGGGC
AGTAAGATCA ACGAGCAAAC CCTCGCCGAA AAATATGGTA TCAGCCGCGG CCCAACCCGT
GAGGCGCTGC AAACCTTAGA AAGACAACGC CTCGTTGTCC GCGCCCCTCA TGTAGGAGCC
CGAGTCGCCC AGCTCACCGT GAGCGAGTTA AACGATTTAT ATCAATTACG TAGCGTGCTC
GAAGGCATGG CCTGCGAACT TGCCGCCAGC CGAATTACCC CAGAACAGCT AGCCAAGTTA
GAAGACCTGC TCGCCGTGCA AGAAACCGCG CTGGCCAATG GCGATACCTA TTTCCAAGAG
GAAGGCGATG TCGACTTCCA CTACCAAATC ATCCAAGCCA GCGGCAATAA GCATCTGCAA
GAAACCTTAA TTGGCGGGCT CTACCACCTG CTGCGGATGT ACCGCTATCA GTGCACCAAC
AAGAATCGCC CAGTAAAAGC CATTGCCGAA CATAGACGTA TCGTCGAGGC CATCGCCCAG
CGTGATGGAG AACTCGCCAG TCTGTTGATG CGTCGCCATA TTGAGCAAGG CCGTAAAAAT
ACCGAATTAC GCTTGATTGA ATTACAAGCT AACGCCGCCG CGAAAGAAAC CTTAGCCAAT
ATTAACTAA
|
|---|
| Protein sequence | MLKQETIFPT DDTQSSVAHA ATSTTNKVKS LASEKSSTTL ADQILVQIQT SIIKGELPPG
SKINEQTLAE KYGISRGPTR EALQTLERQR LVVRAPHVGA RVAQLTVSEL NDLYQLRSVL
EGMACELAAS RITPEQLAKL EDLLAVQETA LANGDTYFQE EGDVDFHYQI IQASGNKHLQ
ETLIGGLYHL LRMYRYQCTN KNRPVKAIAE HRRIVEAIAQ RDGELASLLM RRHIEQGRKN
TELRLIELQA NAAAKETLAN IN
|
|---|
| |