| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3816 |
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| Symbol | |
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| ID | 4480026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4583296 |
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| End bp | 4584000 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639728429 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_871440 |
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| Protein GI | 117922248 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAT TCTTACTGTT ATCAAGCCTT GCCCTCGCCT GCGCGCCCGT ATTCGCGGCT
TCCAACTCGA GTATCAATAT CGCAGAAGTC GACAAAGCGG CAAGCACCTT GAATATCGAA
AAATTACAAC AGCTCAGCAC GACAACACAG GATTACGAAG CAGCCTATGC CAACTATCGT
TTAGCCATCA GCGCCAATGT TATGGGGCAA AAAACCTTGG CGGAACAGGC CTTAACTTCG
GCGCAAACCA GCTTAGAAGC CATCAACAAT ACCCAAGCCG ATGCCGAGTC CCTCGCACTA
TTATCGTCCG TTTACGGCAT GCAAATCGCC TTGGATAACA GCAAAGGTGC CGAGCTTGTG
AGCAAATCCG CCAATGCCAT CGCTCAAGCC GAACAGCTGG CACCGCTTAA TCCGCGGGTC
GCATTAGTAA AAGCGATTGC CGCCTATAAT ACGCCCGCCA TGTTTGGTGG CAGCATGCAA
GTTGCCAAGT CACTCGCCAG CAGCGCCATT GAACGGTTTA ATCAACCTTG CGAGGACATA
TGCTGGGGTG AGGCCGAAGC TTACACTTGG CGCGGACTCG CAAAACAGGA ATTAGGCGAC
GCCCAAGGGG CGATTGAAGA TTGGCAACAG GCGCTGCAAG TGGAAAAAGA TTATGGTTGG
GCTAAGTTTT TACTTCAGCA AAATCAGCAA ATAAGTGCAA AATAA
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| Protein sequence | MKTFLLLSSL ALACAPVFAA SNSSINIAEV DKAASTLNIE KLQQLSTTTQ DYEAAYANYR
LAISANVMGQ KTLAEQALTS AQTSLEAINN TQADAESLAL LSSVYGMQIA LDNSKGAELV
SKSANAIAQA EQLAPLNPRV ALVKAIAAYN TPAMFGGSMQ VAKSLASSAI ERFNQPCEDI
CWGEAEAYTW RGLAKQELGD AQGAIEDWQQ ALQVEKDYGW AKFLLQQNQQ ISAK
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