Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3812 |
Symbol | |
ID | 4480022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4577593 |
End bp | 4579695 |
Gene Length | 2103 bp |
Protein Length | 700 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639728425 |
Product | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase |
Protein accession | YP_871436 |
Protein GI | 117922244 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0497071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTATCTGT TTGAAGGTCT AAAGGAGTCT GCTTCCGGTT ACTTAGAACC TGAACAGGTA GAATTGCTCA AGCAGGCGTA CCAAGTTGCG CGTGATGCCC ATGAAGGGCA AATGCGCACC AGCGGCGAAC CTTATATTAC CCATCCGGTT GCGGTTGCCC GCATCCTCGC CGAGATGCGT CTCGATCACG AGACGCTGAT GGCTGCTTTG CTGCACGACA CCATCGAAGA TACCCATGTC ACCAAAGAGG ACTTGGCCGA ACAATTTGGC GAAGCCGTGG CAGAGTTGGT TGAAGGGGTG TCTAAGCTCG ACAAGCTGAA ATTTCGCGAT AAAAAAGAAG CCCAAGCGGA AAACTTTCGC AAAATGATGA TGGCAATGAC GCAGGATATC CGCGTTATTC TCATCAAGCT TGCCGACCGT ACCCACAACA TGCGTACCTT AGGTGCACTG CGCCCCGATA AACGCCGCCG CATTGCCCGC GAAACCTTAG AGATTTACGC GCCGATTGCC AACCGACTCG GTATTCACAA TATCAAGACG GAGTTAGAGG ATTTAGGCTT CCAAGCCTAT TATCCGATGC GCTATCGGGT GTTAAAGGAA GTGGTCAAAG CTGCCCGTGG TAACCGTAAA GAACTCATTC AAGGTATTGA AGCTGCGGTA TTAACTCGCC TAAACGATGC GGGCATTAAA GGCAAAGTGA AAGGTCGCGA GAAAAACCTC TACTCCATCT ATAACAAGAT GCAGAGCAAG GAACTCCAGT TCCAAGAGGT GATGGATATC TACGCCTTTC GCGTCATCGT CGACTCCATC GATACTTGCT ACCGCGTCCT CGGTGCTATG CACGGCCTGT ATAAACCGCG TCCGGGTCGC TTTAAAGATT ATATCGCCAT CCCAAAAGCC AACGGTTATC AGTCGCTACA TACCTCGTTA TTCGGCCCAC ACGGCGTGCC CGTCGAGATC CAAATTCGTA CCGAAGATAT GGATCAAATG GCCGACAAAG GGGTTGCGGC CCACTGGGCT TACAAAGGCG GTGCCGATGG TCAAGGCACT ACCACGCAAG TGCGTGCCCG CAAGTGGATG CAAAGCTTGC TGGAACTGCA ACAGAGCGCC AGCACCTCCT TCGAATTCGT GGAAAACGTT AAAACCGAAC TCTTCCCCGA AGAGATTTAC GTCTTTACCC CCGAAGGTCG CATTTTAGAA TTACCGGTTA ACGCCACCGC CGTCGACTTT GCCTATGAAG TCCACACCGA TGTGGGCAAT ACCTGTGTCG GCGCCCGCGT TAACCGCCAA GCTTATCCGT TAAGCCAGCC ATTAATCTCC GGCCAAACCG TTGAGATCAT TACCGCCAAA GGCGCGCGTC CGAATGCCGC TTGGCTTAAC TTTGTGGTGA CGGGTAAAGC CCGCGCCAAA ATCCGCCAAG TGCTTAAGAG CCTAAAAGCA GACGATGCTA TCGCCCTTGG CCGCCGTTTG CTAAACCATG CGCTGGGTAA AACCAAGCTC GATAGTATTC CTGCCGAGCA AATTGATAAA GTCGTGCGCG ATACCAAGCA CGCCAATTTA AATTCCTTAC TCGCCGACAT CGGTCTTGGC AATGCCATGA GCATAGTCAT CGCCCAACGT TTGATTGGCG ATAATTTAGA GAATCAAGAG AGCCGCGATT CTCACCTGAT GCCAATCCGT GGCGCCGAAG GTATGTTAGT GACCTTCGCC AACTGTTGCC GCCCGATCCC AGGTGATGCG GTGATAGCCC ACGTGAGCCA AGGCAAAGGC TTAGTCGTCC ACATGGAAAA CTGCGCTAAC ATTCGCGGTT ACCAAGGCGA GCCAGATAAA TATATTCCCG TACAGTGGGA CAATGTCGAA GGCGTCGAAT ATCAAGCCAA TCTGCGGGTG GAAATTGTTA ACCACCAAGG CGCGCTGGCG AAGATCACCT CGATTATCGC CGCCGAAGGT TCGAACATTC ACAACCTTAG CACCGAAGAG CGCGATGGCC GCGTTTACTT GATTAACCTG CGGATTTCGG TGAAGGACAG GATCCATTTA GCTAACGTGA TGCGCCGTAT CCGGGTACTG CCCGAGGTGT TACGTACATC CCGTAATCGT TGA
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Protein sequence | MYLFEGLKES ASGYLEPEQV ELLKQAYQVA RDAHEGQMRT SGEPYITHPV AVARILAEMR LDHETLMAAL LHDTIEDTHV TKEDLAEQFG EAVAELVEGV SKLDKLKFRD KKEAQAENFR KMMMAMTQDI RVILIKLADR THNMRTLGAL RPDKRRRIAR ETLEIYAPIA NRLGIHNIKT ELEDLGFQAY YPMRYRVLKE VVKAARGNRK ELIQGIEAAV LTRLNDAGIK GKVKGREKNL YSIYNKMQSK ELQFQEVMDI YAFRVIVDSI DTCYRVLGAM HGLYKPRPGR FKDYIAIPKA NGYQSLHTSL FGPHGVPVEI QIRTEDMDQM ADKGVAAHWA YKGGADGQGT TTQVRARKWM QSLLELQQSA STSFEFVENV KTELFPEEIY VFTPEGRILE LPVNATAVDF AYEVHTDVGN TCVGARVNRQ AYPLSQPLIS GQTVEIITAK GARPNAAWLN FVVTGKARAK IRQVLKSLKA DDAIALGRRL LNHALGKTKL DSIPAEQIDK VVRDTKHANL NSLLADIGLG NAMSIVIAQR LIGDNLENQE SRDSHLMPIR GAEGMLVTFA NCCRPIPGDA VIAHVSQGKG LVVHMENCAN IRGYQGEPDK YIPVQWDNVE GVEYQANLRV EIVNHQGALA KITSIIAAEG SNIHNLSTEE RDGRVYLINL RISVKDRIHL ANVMRRIRVL PEVLRTSRNR
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