| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3773 |
|---|
| Symbol | slmA |
|---|
| ID | 4479983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 4532845 |
|---|
| End bp | 4533438 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639728386 |
|---|
| Product | nucleoid occlusion protein |
|---|
| Protein accession | YP_871397 |
|---|
| Protein GI | 117922205 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.461125 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTAA GCCCAAAAAT TAATCGTCGT GAACACATAC TGCAATGCCT AGCGCAAATG
CTAGAAACCA GCCCAGGACA ACGTATTACC ACCGCTAAAC TCGCCTCTGA GGTCGGTGTA
TCGGAAGCGG CACTCTATCG CCACTTTCCG AGTAAGGCGC GGATGTTTGA AGGGTTAATT
GAGTTTATTG AAGAGTCATT ACTCTCCCGC ATCAACATCA TCATGAACGA TGAAAAAGAC
ACCATGAGAC GTTGCCAATT AGTGCTACAA CTGCTGTTGA TTTTCGCCGA GCGCAACCCT
GGGATCTCTC GGGTGCTCAA TGGCGATGCG CTCTTAGGTG AAAACGAGCG TCTACGCAGT
CGTATCAGCA CCCTATTTGC CAAAATTGAA ACCCAACTCA AGCAAATTCT GCGGGAAAAA
ACCCTACGTG AAGGGAAAGG CTTTAATTTA GATGAGGCTA TTTTAGCTAA TTTGCTGTTA
GCCTTCGCCG AAGGGCGAAT CGCCCAATTT GTACGCAGCG AGTTTAAACT CAAACCAACG
CAGCACTTCG ATGAACAGTG GCGCTTTATT CAGCATCAGC TGTTACAAAG CTAA
|
|---|
| Protein sequence | MAVSPKINRR EHILQCLAQM LETSPGQRIT TAKLASEVGV SEAALYRHFP SKARMFEGLI
EFIEESLLSR INIIMNDEKD TMRRCQLVLQ LLLIFAERNP GISRVLNGDA LLGENERLRS
RISTLFAKIE TQLKQILREK TLREGKGFNL DEAILANLLL AFAEGRIAQF VRSEFKLKPT
QHFDEQWRFI QHQLLQS
|
|---|
| |