Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3757 |
Symbol | |
ID | 4479967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4514896 |
End bp | 4516245 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639728370 |
Product | aromatic hydrocarbon degradation membrane protein |
Protein accession | YP_871381 |
Protein GI | 117922189 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2067] Long-chain fatty acid transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0902024 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAAC GTCTTCTGAC TTTGGCTGTG ACTGCGGCCT TATTAAGCAC AACGACTCAA GTCCAAGCAG CGGGTTTCCA ACTGGCTGAA TACTCAGCGA CTGGCTTAGG CCGCGCCTTC GCCGGTGAAG CCGCGATTGC CGATAACGCT TCAGTACAAG GCCGCAACCC AGCGATGCTG ACCTATTTAG AAGGTCGTCA GCTGTCTGCT GGTGGTATCT ATGTGATGCC TAACGTGGAT GTTAAAGGTG ATGTGAGCTT AAGCTCTCCA TTACTGGGCC CAAATCCCGT TGAAATGAAA GGCGGCGATG CCTTAGATGT GGCCGATGAT GCATTAGTGC CTAACTTCTA TTATTCCAAC CAGTTAAACG ACCAATGGAC TTGGGGTCTG GCGGTTAACT CAAACTATGG TCTGTCAACC GAGTTACCTA AAACCCACGC CGCGGCGATT TTCGGTAATA AAACTGCGGT GACCACTGTT GAGTTTAACC CTAACATCGC TTACCGCGTA AATGATGCTG TCAGCGTCGG TGGTGGTGTA CGTATCGTTT ACGGTGAAGG TGAAATCGGT GCCTCGTTAC CGGGTTGGGT CGATCGCATT AAGCCCGCAT TACCAGCACA AGTGTCTGCC ATGCTACCGC CGGGTGGTAC TGAGCTGAAA AGCATGAAAG GCGACGACAT TGGCTACGGC TGGCAATTAG GCACGAGCTG GCAGATTAAT CCTGCACACC GTGTCGGTCT GGCCTATCAC AGCGGCGTAA AGCTTGATTT AGAAGGTCAT GCATCAGGTG TGATTTACGA TGGCGGCCAG AATCTGTCAA TTGAAGGTTA CATTCCGCTC GAACTGCCTG CATTTGCCGA GCTGTCCTCC TATCACCAAT TAACGGATAA CTGGGCAATG CACGCCAGCG TTAACTGGAC CGATTGGAGC GTATTCGATC AGTTAGTGGC TTACTTCCCT GGTGAAGTTA AGCCAAAGGG TGACTTAGAG TCTGACTTAG TCAAAGAAGA GCACTTTGAA GATAACTGGC GCTTTGCCTT AGGTACCACC TATCAAGTCA GCAATGAATG GTTAGTACGC GCGGGTGTGG CCTTAGATAA AACGGCGGCC ACTAATGAAT GGCGTACTAC GACTATCCCT GACTCTGACC GTCTGTGGTT CTCTGTTGGT GCGGGCTATC AGGCAACTAA AAACCTGAAT GTTGATTTTG CACTGACCTA TATCCGTGCC ACAGGTGATG CGCCAATCAA CGAACAGCAA AATCTGCTTA ACCTTGCTAC AGTGAGTTTC AACGGTGAAG CGAGTGGTGA TGTTTGGTTA GCCGGTATCC AAATGAGCTA CAAGATGTAA
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Protein sequence | MQKRLLTLAV TAALLSTTTQ VQAAGFQLAE YSATGLGRAF AGEAAIADNA SVQGRNPAML TYLEGRQLSA GGIYVMPNVD VKGDVSLSSP LLGPNPVEMK GGDALDVADD ALVPNFYYSN QLNDQWTWGL AVNSNYGLST ELPKTHAAAI FGNKTAVTTV EFNPNIAYRV NDAVSVGGGV RIVYGEGEIG ASLPGWVDRI KPALPAQVSA MLPPGGTELK SMKGDDIGYG WQLGTSWQIN PAHRVGLAYH SGVKLDLEGH ASGVIYDGGQ NLSIEGYIPL ELPAFAELSS YHQLTDNWAM HASVNWTDWS VFDQLVAYFP GEVKPKGDLE SDLVKEEHFE DNWRFALGTT YQVSNEWLVR AGVALDKTAA TNEWRTTTIP DSDRLWFSVG AGYQATKNLN VDFALTYIRA TGDAPINEQQ NLLNLATVSF NGEASGDVWL AGIQMSYKM
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