Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3699 |
Symbol | |
ID | 4479900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4440522 |
End bp | 4441046 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639728303 |
Product | ATP-dependent protease peptidase subunit |
Protein accession | YP_871323 |
Protein GI | 117922131 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.085186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCACTA TCGTATCAGT ACGCCGTAAT AACCAAGTAG TCATCGCCGG CGATGGCCAA GTCTCCCTAG GCAATACCGT CATGAAAGGT AACGCCAAGA AAGTGCGTCG CTTATATCAC AACAAAGTGT TGGCAGGTTT TGCTGGCGGC ACCGCCGACG CTTTTACCCT ATTTGAGCGT TTCGAGTCCA AACTCGAGAT GCACCAAGGC CATCTATTAC GATCGGCCGT TGAACTGGCC AAAGATTGGC GTACCGACCG CATGCTGCGC AAGCTCGAGG CCATGCTTGT GGTCGCCGAT GCCGAAGCGT CACTGATCAT CACTGGTAAT GGTGACGTAG TGCAGCCAGA ACATGATTTA GTCGCCATTG GCTCGGGCGG TAACTATGCC CAAGCGGCGG CATTAGCCCT GTTACAAAAT ACCGAATTAT CGGCGCTGGA AATTGCAGAA AAGTCGTTGA CTATTGCAGG CGATATCTGC GTATTCACCA ATCAATTCAA AACAATTGAA GAACTTAACT ACTAA
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Protein sequence | MTTIVSVRRN NQVVIAGDGQ VSLGNTVMKG NAKKVRRLYH NKVLAGFAGG TADAFTLFER FESKLEMHQG HLLRSAVELA KDWRTDRMLR KLEAMLVVAD AEASLIITGN GDVVQPEHDL VAIGSGGNYA QAAALALLQN TELSALEIAE KSLTIAGDIC VFTNQFKTIE ELNY
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