Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3680 |
Symbol | |
ID | 4476279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4419221 |
End bp | 4419979 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639728285 |
Product | uridine phosphorylase |
Protein accession | YP_871305 |
Protein GI | 117922113 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2820] Uridine phosphorylase |
TIGRFAM ID | [TIGR01718] uridine phosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0823694 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATG TATTTCACTT AGGTTTGACC AAAGCGATGC TCGATGGTGC CACTTTGGCG ATTGTGCCGG GCGATCCAGA GCGTGTAAAA CGTATTGCCG AGTTAATGGA TAATGCCACA TTCCTCGCAA GCCACCGCGA GTACACCAGC TACTTAGCGT ATGCTGACGG TAAGCCAGTG GTGATTTGCT CTACCGGTAT CGGTGGTCCA TCGACTTCTA TCGCAGTAGA AGAGTTAGCG CAATTAGGCG TGAATACCTT CCTGCGTGTG GGCACCACAG GTGCGATTCA ACCCCATGTA AATGTGGGTG ATGTAATTGT GACTCAAGCG TCAGTGCGTT TAGATGGCGC GAGCTTGCAT TTTGCACCTA TGGAGTTCCC AGCGGTTGCT AACTTCGAAT GTACCACAGC TATGGTTGCT GCGTGCCGCG ATGCGGGCGT AGAGCCTCAT ATCGGTGTTA CTGCATCTTC TGATACCTTC TACCCAGGTC AAGAGCGCTA TGACACTGTG ACTGGCCGTG TGACCCGTCG TTTTGCTGGC TCAATGAAAG AGTGGCAGGA TATGGGCGTG CTGAACTATG AAATGGAATC AGCGACCCTA TTCACTATGT GTGCGACTCA AGGTTGGCGT GCGGCGTGTG TGGCTGGCGT TATCGTAAAC CGCACTCAAC AGGAAATCCC GAACGAAGCG ACAATGAAGC AAACTGAAGT CAGTGCTGTT TCTATCGTTG TAGCTGCGGC TAAGAAGCTT CTGGCTTAA
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Protein sequence | MADVFHLGLT KAMLDGATLA IVPGDPERVK RIAELMDNAT FLASHREYTS YLAYADGKPV VICSTGIGGP STSIAVEELA QLGVNTFLRV GTTGAIQPHV NVGDVIVTQA SVRLDGASLH FAPMEFPAVA NFECTTAMVA ACRDAGVEPH IGVTASSDTF YPGQERYDTV TGRVTRRFAG SMKEWQDMGV LNYEMESATL FTMCATQGWR AACVAGVIVN RTQQEIPNEA TMKQTEVSAV SIVVAAAKKL LA
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