| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3659 |
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| Symbol | |
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| ID | 4476258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4394861 |
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| End bp | 4396081 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639728264 |
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| Product | type II secretion system protein |
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| Protein accession | YP_871284 |
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| Protein GI | 117922092 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.151178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTTT ATCAATACCG TGGACGCAGT GGACAAGGTC AGGCCGTAAC GGGTCAGCTC
GATGCGGCCT CCGAGGGGGC GGCGGCCGAT ATGTTGTTAG CCCGTGGCAT TATCCCGTTA
GAAGTCAAAG TCGCCAAAGA AACTAAGTCC TTTACCTTGG CGCAGTTGTT TAAGCGCAAA
GTCGGCTTGG ATGAACTGCA AATTTTTACC CGGCAAATGT ACTCGTTAAC GCGCTCGGGG
ATCCCCATCC TGCGCGCCAT TGCAGGCTTA TCCGAAACCG CCCACTCCCA ACGAATGAAA
GATGCGCTGA ATGATATTTC AGAGCAGTTA ACGGCGGGTC GCCCGTTGTC ATCGGCCATG
AACCAACATC CGGATGTGTT TGATTCTCTT TTTGTTTCTA TGGTGCATGT GGGTGAAAAC
ACGGGTAAGT TAGAGGACGC TTTTATTCAG CTCTCGGGTT ATATCGAGCG TGAGCAGGAA
ACCCGTCGCC GGATTAAGGC TGCGATGCGT TATCCCATAT TTGTATTGAT TGCCATCGCG
CTAGCCATGG TGATTTTAAA CATCATGGTG ATCCCCAAAT TTGCCGAGAT GTTTGCTCGC
TTTGGTGCCG ACCTGCCTTG GGCGACTAAG GTGTTGATCG GCACATCAAA CTTGTTTGTC
AACTATTGGC CCCTGATGCT GGTAATACTG CTCGGGACCA TTATTGGCAT CCGCTACTGG
CACCATACGG AAAAAGGCGA GAAACAATGG GACAAATGGA AGTTACACAT TCCCGCCGTG
GGCTCGATTA TTGAGCGCTC GACCCTCTCA CGTTATTGCC GCAGTTTTTC GATGATGTTG
AGCGCGGGGG TGCCGATGAC GCAGGCGCTC AGTCTAGTGG CCGATGCGGT GGATAATGCG
TATATGCACG ACAAAATTGT CGGGATGCGC CGTGGTATTG AGTCTGGCGA GTCTATGCTG
AGGGTATCGA ACCAGAGTAA ATTGTTTACG CCACTGGTGT TGCAAATGGT CGCGGTAGGC
GAAGAAACCG GACAGATTGA CCAACTATTA AATGATGCCG CCGATTTTTA CGAAGGTGAG
GTCGATTACG ATCTTAAAAA TCTCACCGCT AAGTTAGAAC CGATTCTGAT CGGAATTGTG
GCTGCGATTG TATTGGTGCT GGCGCTGGGT ATTTACCTGC CGATGTGGGA TATGCTCAAC
GTAGTCAAAG GCGGCAAATA A
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| Protein sequence | MPVYQYRGRS GQGQAVTGQL DAASEGAAAD MLLARGIIPL EVKVAKETKS FTLAQLFKRK
VGLDELQIFT RQMYSLTRSG IPILRAIAGL SETAHSQRMK DALNDISEQL TAGRPLSSAM
NQHPDVFDSL FVSMVHVGEN TGKLEDAFIQ LSGYIEREQE TRRRIKAAMR YPIFVLIAIA
LAMVILNIMV IPKFAEMFAR FGADLPWATK VLIGTSNLFV NYWPLMLVIL LGTIIGIRYW
HHTEKGEKQW DKWKLHIPAV GSIIERSTLS RYCRSFSMML SAGVPMTQAL SLVADAVDNA
YMHDKIVGMR RGIESGESML RVSNQSKLFT PLVLQMVAVG EETGQIDQLL NDAADFYEGE
VDYDLKNLTA KLEPILIGIV AAIVLVLALG IYLPMWDMLN VVKGGK
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