Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3647 |
Symbol | |
ID | 4476246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4381966 |
End bp | 4383027 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639728253 |
Product | rod shape-determining protein MreC |
Protein accession | YP_871273 |
Protein GI | 117922081 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1792] Cell shape-determining protein |
TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0178406 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCTA TTTTTGTTCG TGGTATTTCG AACCAGTTCC GTTTAACACT GGCAATTATC CTGTCGGTGA TTTTGCTCGC CGCAAATCAC CGTCTCGATC CTGCCCGTGA ATCCCTTTCA TCCGCCTTAA GCCCCATCCA ATACCTTGCG AGTGTGCCCA GTGCGATCCT CGATTGGTCA TCGGAGAGTT TTGCTACCCG CAATATGCTG GCGTTGCAAA ATAAAGAGCT GTTAAGGCAA CAATTATTAA TGAGTGAGCG TCTGCAGCGC TTCGAGCATC TGCGTCAGGA AAACGAGCGT TTACGCGCTC TGTTGGGGTC GCCTGCCTAT CAGGATTCCC GCAAGATGGT GGCTGAAGTG ATGGAGGTGG CTAGCGATCC TTCCCACCAT TATGTAGTGC TTAACCACGG CTCGCGCAGT GGGGTATTTG TTGGTCAACC CGTAGTGGAT GCCCAGGGCG TTGTCGGCCA GGTTGTGCAG GTCAGCGAGA TGACCAGCCG CGTGCTCTTG CTCTCCGATG TGTCCCACGG TTTACCCGTG CGAATTACCC GTAACGATGT GCGTTTAGTG GCTAATGGTA CTGGTGAGCT CGATGAGATT GAACTGCGAC ATGTGGCCAA GAGTACCGAT ATTCGCGTGG GCGATTTATT GGTAACCTCA GGCCTTGGTA ATCGCTTCCC AGAAGGTTAT CCGGTGGCGC GGGTCATGGA AGTCTTAACC GAAGACGGTC AGAGCTATGC GCGTGTCACG GCTCAGCCAT TAGCGGCGCT CGATAGGATT CGTTATCTGC TGTTGATTTG GCCATCCCCA GATTCTGGCG TGACTTTGCC GAATCAAATT CCTGTGCCAG CTGCGGATCA TCCTGCGGAA GAAGCTAAAC CAGATGCCGG CAATGGCAAT GCGAATCCTC AAGGCGCTGC TGCTAATGCG ACCGTGCCTA GTAACGCAGT ACCTAATAGC ACTGTACCTA ATACGACAGC GCCGAACGCC GCTGCGGCGC CAAGCAATGC CAATGGTGCA TCGAACGCTG CCACCACTCA ACCGCCAGCC GAGGTGCACT AA
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Protein sequence | MKPIFVRGIS NQFRLTLAII LSVILLAANH RLDPARESLS SALSPIQYLA SVPSAILDWS SESFATRNML ALQNKELLRQ QLLMSERLQR FEHLRQENER LRALLGSPAY QDSRKMVAEV MEVASDPSHH YVVLNHGSRS GVFVGQPVVD AQGVVGQVVQ VSEMTSRVLL LSDVSHGLPV RITRNDVRLV ANGTGELDEI ELRHVAKSTD IRVGDLLVTS GLGNRFPEGY PVARVMEVLT EDGQSYARVT AQPLAALDRI RYLLLIWPSP DSGVTLPNQI PVPAADHPAE EAKPDAGNGN ANPQGAAANA TVPSNAVPNS TVPNTTAPNA AAAPSNANGA SNAATTQPPA EVH
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