Gene Shewana3_3647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3647 
Symbol 
ID4476246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4381966 
End bp4383027 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content54% 
IMG OID639728253 
Productrod shape-determining protein MreC 
Protein accessionYP_871273 
Protein GI117922081 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0178406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCTA TTTTTGTTCG TGGTATTTCG AACCAGTTCC GTTTAACACT GGCAATTATC 
CTGTCGGTGA TTTTGCTCGC CGCAAATCAC CGTCTCGATC CTGCCCGTGA ATCCCTTTCA
TCCGCCTTAA GCCCCATCCA ATACCTTGCG AGTGTGCCCA GTGCGATCCT CGATTGGTCA
TCGGAGAGTT TTGCTACCCG CAATATGCTG GCGTTGCAAA ATAAAGAGCT GTTAAGGCAA
CAATTATTAA TGAGTGAGCG TCTGCAGCGC TTCGAGCATC TGCGTCAGGA AAACGAGCGT
TTACGCGCTC TGTTGGGGTC GCCTGCCTAT CAGGATTCCC GCAAGATGGT GGCTGAAGTG
ATGGAGGTGG CTAGCGATCC TTCCCACCAT TATGTAGTGC TTAACCACGG CTCGCGCAGT
GGGGTATTTG TTGGTCAACC CGTAGTGGAT GCCCAGGGCG TTGTCGGCCA GGTTGTGCAG
GTCAGCGAGA TGACCAGCCG CGTGCTCTTG CTCTCCGATG TGTCCCACGG TTTACCCGTG
CGAATTACCC GTAACGATGT GCGTTTAGTG GCTAATGGTA CTGGTGAGCT CGATGAGATT
GAACTGCGAC ATGTGGCCAA GAGTACCGAT ATTCGCGTGG GCGATTTATT GGTAACCTCA
GGCCTTGGTA ATCGCTTCCC AGAAGGTTAT CCGGTGGCGC GGGTCATGGA AGTCTTAACC
GAAGACGGTC AGAGCTATGC GCGTGTCACG GCTCAGCCAT TAGCGGCGCT CGATAGGATT
CGTTATCTGC TGTTGATTTG GCCATCCCCA GATTCTGGCG TGACTTTGCC GAATCAAATT
CCTGTGCCAG CTGCGGATCA TCCTGCGGAA GAAGCTAAAC CAGATGCCGG CAATGGCAAT
GCGAATCCTC AAGGCGCTGC TGCTAATGCG ACCGTGCCTA GTAACGCAGT ACCTAATAGC
ACTGTACCTA ATACGACAGC GCCGAACGCC GCTGCGGCGC CAAGCAATGC CAATGGTGCA
TCGAACGCTG CCACCACTCA ACCGCCAGCC GAGGTGCACT AA
 
Protein sequence
MKPIFVRGIS NQFRLTLAII LSVILLAANH RLDPARESLS SALSPIQYLA SVPSAILDWS 
SESFATRNML ALQNKELLRQ QLLMSERLQR FEHLRQENER LRALLGSPAY QDSRKMVAEV
MEVASDPSHH YVVLNHGSRS GVFVGQPVVD AQGVVGQVVQ VSEMTSRVLL LSDVSHGLPV
RITRNDVRLV ANGTGELDEI ELRHVAKSTD IRVGDLLVTS GLGNRFPEGY PVARVMEVLT
EDGQSYARVT AQPLAALDRI RYLLLIWPSP DSGVTLPNQI PVPAADHPAE EAKPDAGNGN
ANPQGAAANA TVPSNAVPNS TVPNTTAPNA AAAPSNANGA SNAATTQPPA EVH