Gene Shewana3_3517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3517 
Symbol 
ID4479301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4218778 
End bp4219785 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content50% 
IMG OID639728126 
Productextracellular solute-binding protein 
Protein accessionYP_871146 
Protein GI117921954 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGGG TAACTTGTGC CGCTTTACTT GGGTTAATGT CGGTTGCGCA GTCTGCACAT 
GCGGATGAAA AATTAACGGT TTATTCCTAT CGCCAAGCGT TTTTGGTTGA GCCTATTCTG
AAGCGTTTCA CCGATGAAAC TGGCATTGCT GTGAATGTGG TATTTGCGAA AGACGGTATT
GCCGAGCGGA TCGCCCGTGA AGGACGCTTA TCCCCTGCGG ATTTAGTGTT AACTTCAGAT
TTCTCTCGCT TGGTTGAATT AGTCGACAAA GACCTGACTT CTCCCGTGAA AAGTGATCAG
CTCAATAGCA ATATCCCCGC GCAATACCGC GATCCCGATG GACAATGGTA TGCCTTAACG
ATGCGTGTGC GTAATCTCTA TACGGCAAAA GATCGTCTCG GCCCACAAGC CATCAGCTAC
GAAGAACTGG CTGATCCTAA GTACAAAGGC AAGATCTGTA CGCGCAGTGG TAAGCATCCT
TACAACATCG CCTTAGTTGC GTCGATGATC GCCCACCACG GTGAGGCCGA CACTAAGACT
TGGTTGCAAG GCGTGAAAAC CAACTTAGCA CGCAAGCCTC AAGGTAACGA TAGGGCGCAG
GTGAAGGCGG TTAAAGAAGG CTTGTGTGAT ATCGCCATCG GCAATAGCTA CTACTACGGC
AATATGCTGC AAGATCCAGA GCAAAAGAGC TGGGCAGAGG CTGTGGCGAT TAACTTCCCG
AATCAAGCCG ATCGCGGTGC CCATGTGAAC GTTTCTGGTA TGGTGCTGAC TCGCCATGCG
CCGAATAAAG ACAATGCCAT CAAGTTGATG GAGTTCTTGT CTGCGGATGT GGCACAAAAA
GCCTATGCCG AAGTAAACAT GGAGTATCCG GTGAAAGCCG ATGTCGCGCC TTCAACCTTG
GTCGCCTCTT GGGGTGAGTT TAAATCCGAC CAATTACCGA TTTTCAAGCT GGCGGAATAC
CACCAAGCGG CGGTGAAATT GTTAGATGAA GTTCAGTTCG ATCTCTAG
 
Protein sequence
MKWVTCAALL GLMSVAQSAH ADEKLTVYSY RQAFLVEPIL KRFTDETGIA VNVVFAKDGI 
AERIAREGRL SPADLVLTSD FSRLVELVDK DLTSPVKSDQ LNSNIPAQYR DPDGQWYALT
MRVRNLYTAK DRLGPQAISY EELADPKYKG KICTRSGKHP YNIALVASMI AHHGEADTKT
WLQGVKTNLA RKPQGNDRAQ VKAVKEGLCD IAIGNSYYYG NMLQDPEQKS WAEAVAINFP
NQADRGAHVN VSGMVLTRHA PNKDNAIKLM EFLSADVAQK AYAEVNMEYP VKADVAPSTL
VASWGEFKSD QLPIFKLAEY HQAAVKLLDE VQFDL