| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3499 |
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| Symbol | |
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| ID | 4479283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4198244 |
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| End bp | 4201132 |
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| Gene Length | 2889 bp |
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| Protein Length | 962 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639728108 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_871128 |
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| Protein GI | 117921936 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGC AAACCCTCAC TCAGTTAGAA CAGCACGATT TATTCTTACG TCGCCATATC
GGCCCGGATA GCAGCCAACA ACAAGAAATG TTGAACTACG TTGGTGCTGA GTCTCTGGAC
GATCTGACGG CGCAAATCGT GCCTGAGTCG ATCCGTTTAA GCCAAGAGTT GAGCATTGGT
GATTCCTGCG GCGAAGCCGA AGGCATTGCT TACATTCGTG GTTTAGCCAA ACAAAACCAA
GTCTTCAAAA GCTACATTGG TATGGGTTAC TACGGTACCC AAGTGCCTAA TGTGATTTTA
CGTAACGTCT TCGAAAATCC AGGTTGGTAC ACGGCGTACA CGCCTTATCA GCCAGAGATC
GCCCAAGGCC GTTTAGAAGC CATTCTAAAC TTCCAACAAG TGTCGATGGA TTTAACCGGT
TTAGATTTAG CGTCAGCGTC ACTGCTGGAC GAAGCGACTG CCGCTGCCGA AGCAATGGCG
CTGGCTAAGC GTGTGTCTAA AGCCAAAAAA GCCAACATCT TCTTCGTAGC CGATGACGTA
TTCCCACAAA CCTTAGACGT AGTGAAGACT CGCGCTGAGT GTTTTGGTTT TGAAGTAGTG
GTAGGTCCTG CCCATGAAGC CGTAAACCAC GAACTGTTTG GTGCCCTGTT CCAGTATTCA
AACCGTTTCG GTCAAATCAC TGACTTCACT GACTTATTCG CCGAATTACG CGCGAAAAAC
GTCATTGTGA CTGTCGCTGC CGACATCATG GCATTAGTGT TACTCAAGTC ACCTGGTGCC
ATGGGCGCCG ACGTGGTCTT CGGTAGCGCA CAACGTTTCG GTGTGCCGAT GGGCTTTGGT
GGTCCACACG CGGCCTTCTT CGTGGCCCGT GACGAGCACA AACGTTCTAT GCCAGGCCGT
ATCATCGGTG TGTCAAAGGA CACCCGTGGT AACCGCGCAC TGCGTATGGC GATGCAAACT
CGCGAGCAAC ATATCCGCCG CGAAAAAGCC AACTCAAACA TTTGTACCGC ACAAATTCTG
TTAGCGAACA TGGCGTCTTT CTACGCCGTA TTCCACGGCC CACAAGGCCT GAAAACCATC
GCATCACGTA TCAACCGCTT CACCGATATC TTAGCCGCTG GCTTACAAGC TAAAGGCGTG
AGCTTAGTGA ACAACACTTG GTTCGATACC ATCAGTATCA AAGGCTTAGA CGTTGCAGCA
GTGAATGCGC GCGCGCTGGC CGCTGAAATG AACCTGCGTT TCGATGCTGA CGGCATCGTT
GGCGTGAGCT TAGATGAAAC CACTATCCGC ACCGATATCG AAGCCCTGTT CGATGTGATT
TTAGGGGCTG GCCATGGCTT AGACGTTGCT GCGTTAGACG CGCAAATCGT GGCTCAAGGT
AGCCAATCGA TTCCAGCTTC TTTAGTGCGT CAAGATGCCA TCCTGAGCCA CCCAACCTTC
AATCGCTACC AAAGCGAAAC CGAGATGATG CGTTATATCA AGCGTCTCGA AAGCAAAGAC
TTAGCACTGA ACTACTCAAT GATTTCATTG GGTTCATGCA CCATGAAGTT AAACGCTGCG
GTTGAAATGA TCCCAGTAAG CTGGCCAGAA TTTGCTAACA TGCACCCATT CTGCCCACTG
GATCAAGCCA AGGGTTACAC TCAACTGATT GAAGAACTGT CTTCATGGTT AGTGAATGTC
ACAGGTTACG ATGCCGTATG TATCCAACCT AACTCTGGTG CACAGGGTGA ATACGCGGGT
CTGCTGGCGA TTCGTAAATA CCACGAGTCT CGCGGCGAAG CCCACAGAAA CATCTGCTTA
ATCCCACAAT CTGCCCACGG CACTAACCCT GCATCGGCGC AATTAGCCGG TATGCAAGTG
GTTGTGACTG CCTGTGACAA GCAAGGTAAC GTGGATTTAG AAGATCTGAA GGCCAAAGCG
GCCGAAGTGG CAGAAAACCT GTCATGTATC ATGATCACTT ACCCATCGAC CCACGGTGTG
TACGAAGAAT CTATCCGCGA AATCTGCAAC ATTGTGCACC AGCACGGTGG TCAAGTTTAC
TTGGACGGCG CCAACATGAA CGCCCAAGTT GGCTTAACCT CACCAGGCTT TATCGGTGCC
GACGTATCGC ACCTTAACCT GCACAAAACC TTCGCGATTC CACACGGCGG CGGTGGTCCA
GGTATGGGCC CAATCGGCGT GAAAGCGCAC TTAGCGCCGT TCGTAGCGGG TCACGTTGTG
GTGAAACCAG GCCGCGAAAG CGATAACAAC GGTGCAGTAT CGGCAGCGCC ATACGGCAGT
GCGGGCATTC TGCCAATCAG CTGGATGTAC ATTAAGCTGC TCGGTTCAAA CGGCCTGAAA
AAGTCGACTC AAACCGCGCT GTTAAACGCT AACTACGTGA TGAAGAAGCT GTCTGAACAC
TACCCAGTAC TGTTCCGTGG CCGTAACGAT CGCGTCGCGC ACGAATGTAT TATCGACCTG
CGTCCAATTA AAGAAGCCTC TGGCGTGACC GAAATGGATA TCGCTAAGCG TCTGAACGAC
TACGGTTTCC ACGCGCCAAC CATGAGCTTC CCTGTTGCGG GCACGCTGAT GATTGAGCCA
ACTGAATCTG AGTCTAAGGT TGAACTGGAC CGCTTTATCG ACGCTATGGT GTCAATCCGC
GCCGAAATCG CTAAGGTTGA AGCAGGCGAG TGGCCAGCGG ATAACAACCC GCTGCACAAC
GCGCCACACA CTATGGCCGA TATTATGGAC CCAGCGTTCG ATTCTCGCCC ATACAGCCGT
GAAGTGGCCG TGTTCCCAAG TGCTGCAGTG CGTACTAACA AGTTCTGGCC AACCGTGAAC
CGTATTGATG ACGTTTACGG TGATCGCAAC TTGTTCTGTG CTTGTGTGCC GTTATCAGAC
TACGAATAA
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| Protein sequence | MTKQTLTQLE QHDLFLRRHI GPDSSQQQEM LNYVGAESLD DLTAQIVPES IRLSQELSIG
DSCGEAEGIA YIRGLAKQNQ VFKSYIGMGY YGTQVPNVIL RNVFENPGWY TAYTPYQPEI
AQGRLEAILN FQQVSMDLTG LDLASASLLD EATAAAEAMA LAKRVSKAKK ANIFFVADDV
FPQTLDVVKT RAECFGFEVV VGPAHEAVNH ELFGALFQYS NRFGQITDFT DLFAELRAKN
VIVTVAADIM ALVLLKSPGA MGADVVFGSA QRFGVPMGFG GPHAAFFVAR DEHKRSMPGR
IIGVSKDTRG NRALRMAMQT REQHIRREKA NSNICTAQIL LANMASFYAV FHGPQGLKTI
ASRINRFTDI LAAGLQAKGV SLVNNTWFDT ISIKGLDVAA VNARALAAEM NLRFDADGIV
GVSLDETTIR TDIEALFDVI LGAGHGLDVA ALDAQIVAQG SQSIPASLVR QDAILSHPTF
NRYQSETEMM RYIKRLESKD LALNYSMISL GSCTMKLNAA VEMIPVSWPE FANMHPFCPL
DQAKGYTQLI EELSSWLVNV TGYDAVCIQP NSGAQGEYAG LLAIRKYHES RGEAHRNICL
IPQSAHGTNP ASAQLAGMQV VVTACDKQGN VDLEDLKAKA AEVAENLSCI MITYPSTHGV
YEESIREICN IVHQHGGQVY LDGANMNAQV GLTSPGFIGA DVSHLNLHKT FAIPHGGGGP
GMGPIGVKAH LAPFVAGHVV VKPGRESDNN GAVSAAPYGS AGILPISWMY IKLLGSNGLK
KSTQTALLNA NYVMKKLSEH YPVLFRGRND RVAHECIIDL RPIKEASGVT EMDIAKRLND
YGFHAPTMSF PVAGTLMIEP TESESKVELD RFIDAMVSIR AEIAKVEAGE WPADNNPLHN
APHTMADIMD PAFDSRPYSR EVAVFPSAAV RTNKFWPTVN RIDDVYGDRN LFCACVPLSD
YE
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