Gene Shewana3_3474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3474 
Symbol 
ID4479258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4167151 
End bp4168587 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content51% 
IMG OID639728083 
Producthypothetical protein 
Protein accessionYP_871103 
Protein GI117921911 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[Z] Cytoskeleton 
COG ID[COG5184] Alpha-tubulin suppressor and related RCC1 domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTCTT ATCCTATATC ACGTCCCTTG GCATTGGTGG CCGCCTTAGT GGCGTTACAA 
TTAACCGCCT GTAGCCAGCC TAAACCCGTA GCCGTAGTCG AAAATGAAAA GGAATCCTTG
CTGCAATTTG ATAACGGCAA GCTTATCCAG TTTAAGGAAG AGGCAAATCC GAATTATCGC
CATATTCCCT GCGATTTACC CGCAGTCGAT ACTGTGGTGA CCAACAGCAC GGCCTTCGCC
GCATTAACTA AGTCAGGAGA GGTCATCACT TGGGGTGATA GTTTTGCCGG TGGCGATAGT
CGCGAAGTGA CGCCAGAGCT CAAGCAGGTG AAGCAAATTG TCCCTGTTAA AGATGGGTTT
GCTGCGCTGC GCCAAGATGG CACTGTGGTC TATTGGGGTA ATGCGGGCAA GTTGAGTCTG
GACAAGGCAT TGCAAGCGCG TATGACTAAT ATCACTAAGC TATTCGCTAA CCGGGAGGCC
GTAGCCGCCC TCGACGCCAA TGGTAAGGTG CATACTTGGG GCTACGGACC TTACGGCGGC
AATAGTTTGC AGGTGCAAAA TGAGTTAGTC GATGTAGTCG ATATCTTTGC TAAAGGGCGC
AGTTTTATTG CCCTGAAAAA AGACGCCAGC GCCGTAGTTT GGGGGGAGGT TGAAAGTTCG
ACCAATATGA AGAAGTTGCA GTCGCAGCTG ACGGATATTA AACATATCGA ATATTTTCAA
AATACCTATG CCGCCTTAAA AAAAGATGGC TCAGTGGTGA GTTGGGGCTG GCGCAGTGAT
GCTTATCCTA TCCGCAGCGC TCTTAAGGAT GTGGCGAGTC TCACGGCAAA CAGTTGTGCG
TTTGCGGTGT TAAGTCCAAC GGGTGACGCG CATTTCTGGG GCGATGGGAC TAACTGTGGC
GTCGATTGGA TTAAGAAAAC CGATATCACA GGCGTGAAAG AGATTATCAG CGTCGGCCCG
GGATTCTTGC TACTGCGTGA CAACGCCGCG CCGCAAATTC TCGCGGACGA TACGGATTAC
GCCTATCTGT TTGGCTTTCA TCATGCTCAA GAGATCCTCG ACAAGTATTG GCAGCAGGGC
AGCAAAATTA CCCTAGGTAA GTCCTCCTTT GCCTTTACGC GCCCCGACGG CAAAGTGGTC
CCCGTCGGTT ATCGGGCAAA CCTTAAAAAT GTCGAGCAAC TGATTGAACG CATTCCGCGC
CTCACTTGGT TAGCGCAGGC AAATGATGGT TTTGTGGGGG TCAGTGAAAA GGGAGAATGG
GTCTCTTGGT CGATGAATCT GGGGATGTTT GATAAATCGC CGGTACAACC CGCCGACTCT
TTGGTGGTTA AGCCGCTGGA ATTTAATCCC GCAGCCCAAT GTGAGACTCC AGAGCAACGG
CAGGCGATTT TGAGTCAGGC AAGGCCGCAG CGTAAAATCA ATTGGTCATT TGACTAA
 
Protein sequence
MQSYPISRPL ALVAALVALQ LTACSQPKPV AVVENEKESL LQFDNGKLIQ FKEEANPNYR 
HIPCDLPAVD TVVTNSTAFA ALTKSGEVIT WGDSFAGGDS REVTPELKQV KQIVPVKDGF
AALRQDGTVV YWGNAGKLSL DKALQARMTN ITKLFANREA VAALDANGKV HTWGYGPYGG
NSLQVQNELV DVVDIFAKGR SFIALKKDAS AVVWGEVESS TNMKKLQSQL TDIKHIEYFQ
NTYAALKKDG SVVSWGWRSD AYPIRSALKD VASLTANSCA FAVLSPTGDA HFWGDGTNCG
VDWIKKTDIT GVKEIISVGP GFLLLRDNAA PQILADDTDY AYLFGFHHAQ EILDKYWQQG
SKITLGKSSF AFTRPDGKVV PVGYRANLKN VEQLIERIPR LTWLAQANDG FVGVSEKGEW
VSWSMNLGMF DKSPVQPADS LVVKPLEFNP AAQCETPEQR QAILSQARPQ RKINWSFD