Gene Shewana3_3457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3457 
Symbol 
ID4476800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4142698 
End bp4143624 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content50% 
IMG OID639728066 
ProductPHB depolymerase family esterase 
Protein accessionYP_871086 
Protein GI117921894 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3509] Poly(3-hydroxybutyrate) depolymerase 
TIGRFAM ID[TIGR01840] esterase, PHB depolymerase family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00100534 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0484591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAAT TGACACTCAT TGCCACTTGC CTCAGCGCAC TGTTATTCAC CCCCGCCTAT 
GCCCAGAGTG AGTATCAGGC ATTTAGCGAA TTTGGCGCCA ATCCCGGTGA GTTAACCGCC
TCCTATTTAT CGCCCGAAGG TCCAGGCCAA GATGCGCTAG TAGTGCTACT GCACGGCTGT
GTGCAGGATG GCGTGGAACT GGCCAACAAT AGCGGTTTAA CCGCCCTCGC CCAAGAGAAA
AAGTTTAGCT TACTGGTGCC ACAGCAGAGT TTTGATAACA ATGTAAAGCG TTGTTATAAC
TGGTTTTCAG CGCAGGATAC TCAGGTGGAT AGCGGCGAGA TGCTATCGCT GAAAAACATG
ATAGCCAAAG CCCAATCCCA ATCCGGCGCA AAACGCGTGT ATGTGATTGG CCTATCCGCC
GGTGGCGCTA TGGCCAGCGC CGCACTGGTT AACTATCCCG ATTTATTCAC CTCAGGCGCG
GTGATCGCAG GCCTGCCTTA CCCCTGCGCT GACAACCTGA CCAAAGCCAT TTCCTGCATG
AAAAAGGGCC CAGCAGAGTC TGTTGAAGAA TTAGTGAGTT TTGCCAAACA GGTGCATCCG
AACCAACAAC ACTGGCCCGC CTTAACCGTG TGGACAGGGC AAAATGATGT GGTGGTGAAT
CCTGAAAATG CCAAACAACT CTCAGCCCAG TGGGTCGCAC TGACCCAAGC GAATAAAACA
CCAAGAGTCG AACAATATGC CGACTATAGT GTTAGCACTT GGTCCGATAC GAGTGGCAAT
AACCTTATTT CGTTAGTCGA AATAAATAAT ATGGGCCATG GCATTGCCGT TAATCCAGAT
ATTAAAAATG GCGGGAACAC GGGAGACTTT TTACTAAAAG CACCTATCAG CAGCATGTCA
GAAATAATCA ATCTTTGGGG AATATAG
 
Protein sequence
MRKLTLIATC LSALLFTPAY AQSEYQAFSE FGANPGELTA SYLSPEGPGQ DALVVLLHGC 
VQDGVELANN SGLTALAQEK KFSLLVPQQS FDNNVKRCYN WFSAQDTQVD SGEMLSLKNM
IAKAQSQSGA KRVYVIGLSA GGAMASAALV NYPDLFTSGA VIAGLPYPCA DNLTKAISCM
KKGPAESVEE LVSFAKQVHP NQQHWPALTV WTGQNDVVVN PENAKQLSAQ WVALTQANKT
PRVEQYADYS VSTWSDTSGN NLISLVEINN MGHGIAVNPD IKNGGNTGDF LLKAPISSMS
EIINLWGI