Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3457 |
Symbol | |
ID | 4476800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4142698 |
End bp | 4143624 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639728066 |
Product | PHB depolymerase family esterase |
Protein accession | YP_871086 |
Protein GI | 117921894 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
TIGRFAM ID | [TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00100534 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0484591 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAAT TGACACTCAT TGCCACTTGC CTCAGCGCAC TGTTATTCAC CCCCGCCTAT GCCCAGAGTG AGTATCAGGC ATTTAGCGAA TTTGGCGCCA ATCCCGGTGA GTTAACCGCC TCCTATTTAT CGCCCGAAGG TCCAGGCCAA GATGCGCTAG TAGTGCTACT GCACGGCTGT GTGCAGGATG GCGTGGAACT GGCCAACAAT AGCGGTTTAA CCGCCCTCGC CCAAGAGAAA AAGTTTAGCT TACTGGTGCC ACAGCAGAGT TTTGATAACA ATGTAAAGCG TTGTTATAAC TGGTTTTCAG CGCAGGATAC TCAGGTGGAT AGCGGCGAGA TGCTATCGCT GAAAAACATG ATAGCCAAAG CCCAATCCCA ATCCGGCGCA AAACGCGTGT ATGTGATTGG CCTATCCGCC GGTGGCGCTA TGGCCAGCGC CGCACTGGTT AACTATCCCG ATTTATTCAC CTCAGGCGCG GTGATCGCAG GCCTGCCTTA CCCCTGCGCT GACAACCTGA CCAAAGCCAT TTCCTGCATG AAAAAGGGCC CAGCAGAGTC TGTTGAAGAA TTAGTGAGTT TTGCCAAACA GGTGCATCCG AACCAACAAC ACTGGCCCGC CTTAACCGTG TGGACAGGGC AAAATGATGT GGTGGTGAAT CCTGAAAATG CCAAACAACT CTCAGCCCAG TGGGTCGCAC TGACCCAAGC GAATAAAACA CCAAGAGTCG AACAATATGC CGACTATAGT GTTAGCACTT GGTCCGATAC GAGTGGCAAT AACCTTATTT CGTTAGTCGA AATAAATAAT ATGGGCCATG GCATTGCCGT TAATCCAGAT ATTAAAAATG GCGGGAACAC GGGAGACTTT TTACTAAAAG CACCTATCAG CAGCATGTCA GAAATAATCA ATCTTTGGGG AATATAG
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Protein sequence | MRKLTLIATC LSALLFTPAY AQSEYQAFSE FGANPGELTA SYLSPEGPGQ DALVVLLHGC VQDGVELANN SGLTALAQEK KFSLLVPQQS FDNNVKRCYN WFSAQDTQVD SGEMLSLKNM IAKAQSQSGA KRVYVIGLSA GGAMASAALV NYPDLFTSGA VIAGLPYPCA DNLTKAISCM KKGPAESVEE LVSFAKQVHP NQQHWPALTV WTGQNDVVVN PENAKQLSAQ WVALTQANKT PRVEQYADYS VSTWSDTSGN NLISLVEINN MGHGIAVNPD IKNGGNTGDF LLKAPISSMS EIINLWGI
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