Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3441 |
Symbol | |
ID | 4476784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4123590 |
End bp | 4124747 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639728050 |
Product | hypothetical protein |
Protein accession | YP_871070 |
Protein GI | 117921878 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2039] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00415893 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.25947 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAAGC CAAGCCTCGT TTTTATCCTC GCCAGCACAG TGGCGCAAAC CGCAGGTGCA GTACAACTCC TAGGAGATGT GGAAGTTTCC CGCATTCCCA CTGCAGAAAA AACCATGGCA GAAGTGGTCT ACCGCTATCA AGCCTTGGAC GAAGGCTTGG CGACTCAGCT TTCCGCACAG AAGAATGAAC GCGATGCAAC CCAACTTGCC GCTCGTCAGG GGCATAGACT GTGGCAACAG GCGGTGCGTG ATGTGCAGTC AGGGCACTTT GACGACAGAT CCCTCTACTG GGCTCGGCTC TCAATGTTAA ATAGCATCAA GAGCAATCGC GCCAATTTCA AAATGGCCGA TTGGCAACAG AATATTTTAG CCAGCGCAGT CGAAAAGGCA TCTCGCGGTT TTAGCGATAT CCAATACGGC GACGATGTGC AGATAAAAAT CTTCCTGACG GGATTCGACC CTTTCTTCCT CGATAAAGAC ATCAGCCAGA GCAATCCCTC GGGCTTGGTC GCCCTTGCCC TCGATGGTTT TAGATTTGAT ATCAACGGCA AAAAAGCCCA AATCGAAACC GCGATGATCC CAGTGCGCTT CGAGGATTTT GATCAAGGCA TTATCGAGTC GCTACTTAGC CCGATTTACC GCGATCCTAA AACCCAGTTT GTCTTTACCG TCAGCATGGG CCGCAGTGAC TTTGATATTG AACGCTTCCC CGGCCGTAAC CGTAGCGCCG CCGCGCCGGA TAACCAAAAT CTGTACACAG GCGGAAGCAA AACCGCGCCT GTCGCCCCCA AACTCAATGG TAAAGACTTT ATCGGCCCAG AGTTTGTTGA GTTTTCACTG CCCGTTGCCG CCATGCAGGT CAAAGACGGC CAATGGAAAG TCAACGACAA CCATACAGTG ACCACACTAG CGCGCGGTGA ATTTAATGCC AGCTCCCTAA GCGAGCTGCA AAATGAAACC TCGGTCGAAG GTTCTGGTGG TGGCTATCTC TCAAACGAGA TTTCTTATCG CGCCATTGTG TTACAGCAAA AGTTCAACAG CCCAGCCAAG GTCGGCCATA TCCACACCCC AAGGGTGAAG GGCTACGACA ACGCCACCGA ACAAGCGATT GTCGAGCAAG TGCGTACTAT GGTGATGCAG GCCACAGCGA GCCTGTAA
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Protein sequence | MLKPSLVFIL ASTVAQTAGA VQLLGDVEVS RIPTAEKTMA EVVYRYQALD EGLATQLSAQ KNERDATQLA ARQGHRLWQQ AVRDVQSGHF DDRSLYWARL SMLNSIKSNR ANFKMADWQQ NILASAVEKA SRGFSDIQYG DDVQIKIFLT GFDPFFLDKD ISQSNPSGLV ALALDGFRFD INGKKAQIET AMIPVRFEDF DQGIIESLLS PIYRDPKTQF VFTVSMGRSD FDIERFPGRN RSAAAPDNQN LYTGGSKTAP VAPKLNGKDF IGPEFVEFSL PVAAMQVKDG QWKVNDNHTV TTLARGEFNA SSLSELQNET SVEGSGGGYL SNEISYRAIV LQQKFNSPAK VGHIHTPRVK GYDNATEQAI VEQVRTMVMQ ATASL
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