| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3437 |
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| Symbol | |
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| ID | 4476780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4114644 |
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| End bp | 4116095 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639728046 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_871066 |
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| Protein GI | 117921874 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0184931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTGCA GATTCTGGGT TTTACTCCTT TGTTTATGCT CACCTTTATG TGTCAATGCC
GAGCGCTTGG CCTCATATCT TAATGCTGCA GACGATGAAT TTGCCAATGC CACCCAGTTG
GTGCGTTACT GCGTCGACCC CGATTGGTTA CCCTATGAAG CGATTCGTGA CGGTCAACAT
GTGGGGATTT CGTCGGATTA TATTCGTTAT ATCGAAGCCC ATTCGTCATT AAAGTTTAGT
CTTGTGCCTA CCACTTCTTG GACACAAACC TTAGATTTCC TACAAACGGG GCGCTGTGAT
TTAACTCCAC TACTCAATAA AACGGTGACT CGGGAGCAGT TTTTACATTT CAGCCATGTG
TATTTTCGCT CCCCCAATGT ATTAGTGTCT CTCAAGGACG AACCCTTTTT GCAAGGGTTT
GAAAATATCG GTGCGCGCAC CTTGGCGGTG CCTGATGGCT ATCGTCTCGC CGAATATATT
CAGCATTATT ATCCCAAGGT TCGCACGATT AAAGTGGCGA GTGAGCCAGC AGGGCTTGAA
GCCGTGCTCG AGAAAAAGGT CGACCTCTTT GTGGGGTCGA TGTTTTCCGT TAATGCCTAT
ATTCAGCAGA CAGGATTCAA TCACCTTAAA ATTGCCGGTT GGGGTGGCCC GGAGGATGAA
CTGCGGGTGG GGGTGAGCGC TGGGCATGAG GCGCTGCTGC CATTAATCAA TCAAGTGCTA
GACAATGTAG ATGAGCTGGA GCGGATCAGG ATTTACCAGA AATGGAACAA CATCACTATC
ATCGATGAAA CCAACTACTT ACTTATCTAT CAAGTGATTG CGGCGACACT GTTAGTCGTG
TGCCTACTGG TAACGCGCAC TTATATGATC AGTCGTTACA ATCGCCGACT AACCGATAAA
AACCAGCAGC TTGAGGAATT GCGTTTGCAG TTAGAGCAAA GTAATACCGA ACTTGAGTTT
TTATCCACCC ACGATCCGCT CACTAAACTC TACAATCGGC ATTACTTTAA TCGACAATTT
GTCCATGAAC ACCGCGCCGC CGCTTCAACG CAAGGGGCCA TTTGCTTGGT GATGTTAGAT
ATCGATTTCT TTAAAGAGAT CAATGACACC TTAGGCCATT CCGTTGGGGA TACTATTTTG
ATGGAGTTGT CCTCGGTATT GCAGCACTGT GTGCGTGAAA GTGATGTGGT TGCACGCTGG
GGCGGGGAAG AGTTTGTGAT CCTTTGCCAT AACACCTCAC TCGAGGCAGT GAAGTCGCTG
TGTCAGCGGA TCACAACCGC CATCAGTGAG TACCATTTTA GTGGCGATGT TCAGCTCACT
TGTAGTTTCG GGATTGCCAA ACTCGCGGCC AATGAGCCGA TGCAATCGTG TTTTGAGCGG
GCAGATAAGG CGCTATATCA GGCAAAAGCG CTGGGGCGGG ACCAGATTTG TGTCGATGAC
ACTCATCTGT AG
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| Protein sequence | MGCRFWVLLL CLCSPLCVNA ERLASYLNAA DDEFANATQL VRYCVDPDWL PYEAIRDGQH
VGISSDYIRY IEAHSSLKFS LVPTTSWTQT LDFLQTGRCD LTPLLNKTVT REQFLHFSHV
YFRSPNVLVS LKDEPFLQGF ENIGARTLAV PDGYRLAEYI QHYYPKVRTI KVASEPAGLE
AVLEKKVDLF VGSMFSVNAY IQQTGFNHLK IAGWGGPEDE LRVGVSAGHE ALLPLINQVL
DNVDELERIR IYQKWNNITI IDETNYLLIY QVIAATLLVV CLLVTRTYMI SRYNRRLTDK
NQQLEELRLQ LEQSNTELEF LSTHDPLTKL YNRHYFNRQF VHEHRAAAST QGAICLVMLD
IDFFKEINDT LGHSVGDTIL MELSSVLQHC VRESDVVARW GGEEFVILCH NTSLEAVKSL
CQRITTAISE YHFSGDVQLT CSFGIAKLAA NEPMQSCFER ADKALYQAKA LGRDQICVDD
THL
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