| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3430 |
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| Symbol | |
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| ID | 4476773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4105840 |
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| End bp | 4108320 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639728039 |
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| Product | nitrate reductase catalytic subunit |
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| Protein accession | YP_871059 |
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| Protein GI | 117921867 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATTA GCCGCCGCGA GTTTCTCAAG GCTAACGCAG CGGTTGCCGC TGCCACGGCC
GTTGGCGTCA CGCTTCCCGT GAAAATGGTC GAAGCCGCCG AGTCAGATAA CATTAAGTGG
GATAAAGCCC CCTGCCGTTT TTGCGGTGTG GGTTGTAGCG TATTAGTCGG TACCAAAGCC
GGTAAAGTCG TCGCGACTAA GGGCGATCCC GAAAGCCCAG TTAACCGTGG TTTGAACTGT
ATTAAGGGTT ACTTCCTGTC GAAAATCATG TACGGCAAGG ACAGATTAAC CACGCCGCTG
CTGCGGATGA AAGACGGCAA ATACCACAAA GAAGGCGAGT TTACCCCAGT AAGCTGGGAT
GTTGCCTTCG ATACTATGGC CGCTAAGTGG AAAAACAGCA TCGCCACTAA GGGCCCTACC
TCAGTCGGTA TGTTCGGCTC GGGCCAGTGG ACCATTTGGG AAGGTTATGC CGCCTCTAAA
TTACATAAGG CCGGATTCTT AACCAACAAT ATCGACCCTA ACGCCCGCCA CTGCATGGCA
TCGGCCGTAG GTGGCTTTAT GCGTACCTTC GGTATCGACG AGCCTATGGG GTGTTACGAT
GACTTAGAAG CCGCCGACCA ATTTGTGCTC TGGGGCGCTA ACATGGCAGA GATGCACCCG
ATCCTGTGGG CACGCTTATC CGACCGTCGT TTAAGCCACA AAGACTGCCG CGTACATGTG
CTATCCACCT TCGAGAACCG CAGTTTCGAC TTAGCGGACA ATCCTATGGT GTTCCGTCCA
CAGTCAGACT TAGTGATCCT CAACTTTATC GCTAACTACA TCATCCAACA CAAAGCCGTG
AATACCGACT TTGTGACTAA ACATACTAAG TTTGCTCTCG GTGTGGATGA TATCGGTTAT
GGTCTACGTC CAGATCATCC GTTAGAGAAG AAAGCCAAAA ACCCAGGCAA TGGTAAGTCT
AGCCCTATCA GCTTCGAAGA ATACGCTAAG TTCGTCAGCA CTTATACGCT GGAATATGCG
GCGAAAATGA GTGGTGTAGA GCCTGAAAAA TTAGAAACCT TAGCTAAGGC CTACGCCGAT
CCTAAGGTCA AAGTCATGAG TCTGTGGACC ATGGGGATCA ACCAGCACGT ACGTGGTGTG
TGGGCAAACA ACATGCTCTA CAACATCCAC TTACTCACAG GTAAAATCGC TACCCCAGGT
AACAGCCCAT TCTCATTAAC GGGTCAACCT TCGGCCTGTG GTACTGCCCG TGAAGTCGGC
ACCTTCGCCC ACCGCTTACC TGCGGATATG GAAGTGGCCA ACGATAAACA CCGCGCCATC
ACAGAAAAAG TGTGGCAGCT ACCAGAAGGC ACCATTCCGC CAAAACCCGG CTTCCATGCC
GTGCTGCAAA GCCGCATGCT CAAAGACGGT AAGCTCAACT GCTATTGGAC CATGTGTACC
AACAATATGC AGGCGGGTCC GAATATCAAC GATGAAATCT ACCCCGGTTT CCGTAACCCA
GAAAACTTTA TCGTGGTATC CGATCCATAC CCAACCGTCA CCGCCATGGC CGCTGACTTA
ATTCTGCCCA CCGCCATGTG GGTTGAGAAA GAAGGTGCCT ACGGTAACGC CGAGCGCCGC
ACCCATATGT GGCATCAACA GGTCAAAGCG CCAGAAGGGG CCAAGTCGGA TCTGTGGCAA
TTAGTCGAGT TCTCAAAACG CTTTAAAGTG TCTGAAGTGT GGCCGGCTGA GCTTATCGCT
AAACAGCCAG AATATGCTGA CAAAACGCTT TATGAAGTGC TGTTTGCCAA CGGCGTCATC
AACAAGTTCC CAACCACAGA TTGTAAGGGC GACTTAAACG ATGAAAGTGC GCACTTTGGC
TTCTATCTGC AAAAAGGCAT TTTCGAAGAA TATGCCGCCT TTGGTCGCGG CCATGGCCAT
GACTTAGCCG ACTTTGACCG TTACCACGAA ACCCGTGGCC TACGCTGGCC TGTGGTTGAG
GGCAAAGAAA CCCTGCGCCG CTTCGTTGAA GGTAGCGATC CTTATGTGAA GGCAGGAGAA
GGCTACAAGT TCTACGGTAA ACCCGATGGC AAAGCGGTGA TTTTCGCCCT GCCCTACGAA
CCTGCAGCAG AAGAGCCAAA TGAAGAATAC GATCTGTGGA TGTCTACCGG CCGTGTACTC
GAACACTGGC ATACAGGTTC GATGACCGCC CGTGTACCTG AGCTGTACCG CGCTTACCCC
GATGCACAAA TCTTTATGCA TCCTGAAGAC GCTAAAGCCC GTGGTCTGCA ACGTGGTGAT
GAAGTGCTAG TCGCATCCCC CCGTGGTGAG GTCAAAACCC GTGTCGAAAC CAAAGGCCGT
AACAAACCGC CACGCGGCGT GGTGTTTATG CCCTTCTTCG ATGCGCGTCA GTTAGTTAAC
AAGTTGATTT TGGATGCGAC CGATCCACTG TCAAAAGAAA CTGACTTTAA GAAGTGTCCC
GTAAAAGTGA TGAAGGCCTA A
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| Protein sequence | MSISRREFLK ANAAVAAATA VGVTLPVKMV EAAESDNIKW DKAPCRFCGV GCSVLVGTKA
GKVVATKGDP ESPVNRGLNC IKGYFLSKIM YGKDRLTTPL LRMKDGKYHK EGEFTPVSWD
VAFDTMAAKW KNSIATKGPT SVGMFGSGQW TIWEGYAASK LHKAGFLTNN IDPNARHCMA
SAVGGFMRTF GIDEPMGCYD DLEAADQFVL WGANMAEMHP ILWARLSDRR LSHKDCRVHV
LSTFENRSFD LADNPMVFRP QSDLVILNFI ANYIIQHKAV NTDFVTKHTK FALGVDDIGY
GLRPDHPLEK KAKNPGNGKS SPISFEEYAK FVSTYTLEYA AKMSGVEPEK LETLAKAYAD
PKVKVMSLWT MGINQHVRGV WANNMLYNIH LLTGKIATPG NSPFSLTGQP SACGTAREVG
TFAHRLPADM EVANDKHRAI TEKVWQLPEG TIPPKPGFHA VLQSRMLKDG KLNCYWTMCT
NNMQAGPNIN DEIYPGFRNP ENFIVVSDPY PTVTAMAADL ILPTAMWVEK EGAYGNAERR
THMWHQQVKA PEGAKSDLWQ LVEFSKRFKV SEVWPAELIA KQPEYADKTL YEVLFANGVI
NKFPTTDCKG DLNDESAHFG FYLQKGIFEE YAAFGRGHGH DLADFDRYHE TRGLRWPVVE
GKETLRRFVE GSDPYVKAGE GYKFYGKPDG KAVIFALPYE PAAEEPNEEY DLWMSTGRVL
EHWHTGSMTA RVPELYRAYP DAQIFMHPED AKARGLQRGD EVLVASPRGE VKTRVETKGR
NKPPRGVVFM PFFDARQLVN KLILDATDPL SKETDFKKCP VKVMKA
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