| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3422 |
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| Symbol | |
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| ID | 4476765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4097796 |
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| End bp | 4100459 |
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| Gene Length | 2664 bp |
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| Protein Length | 887 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639728031 |
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| Product | hypothetical protein |
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| Protein accession | YP_871051 |
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| Protein GI | 117921859 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAGTC CTGCATTAAC CCCTAAGGCC AATCACAGCC AAACCAGAAA CCGCCCATGG
CTGCGGATCT ACTGGGTATT AAAGGTCTTT CTCGCCCACT ATCGCCACGC GCCGCTGCAA
GCGGGCGCGA TTTTGCTTGG CCTTGCCCTC GCCGTGACTT TGCTTATCGG GGTTAAAGCC
ACCAATGATA ATGCTATTCG CAGCTACAGT GAGGCCACAG AACTCTTGAG CCAGCGAGCC
GATGTGTTCT TAAGCGCGCC CATTGGCCAA GAAACCCTCG ACGAATCAGT GTATTTCAGC
CTGCGCCAAG CGGGCATAAG CCAAAGCCTT GCGGTTGTCA GCGGTAGAGT GGCGGGCCTG
AACGGCCAGT TCTGGCAAAT TGAAGGCAGC GATATCGTCG CAGCACTGAC GGCGAGCCTA
AGCTCAAAAG AGGAACAAAA GCACAACGCC AGCACAAAGC AAGCAGCCAA TCCTAAAATG
TCGATGGGAG CGCTGCCGCT CGCCGAGTTA ATGAGTGGTG AGCCGATAGT GGTTATCAGT
CAGAGCCTTG CCAATAAAAT CGCACCCAAT GGCCAACTCG ACCTCGCGCC CGCGTCTTTT
GCACCAGACA AGCTTAAGGT CATCAGTATC GATGATAGCT GGGGGCTGGG CAGTGCGATT
CTGACCGATA TTTCCCTCGC CCAAACGTTG CTCGGGATGC AAGGCAAACT CAGCTATATC
GCCCTATTCA GTGACAGGGA TAAGCTCCCC ACCTTAAAGC AGCGGCTCGA AACCTTAGGT
ATTACGCCGC TTCGCGCCAG TTACAGTCAA CAAGATCAAG GCCAAGCCTT GATGGCGCTT
ACCCGCAGCT TTCATTTAAA CCTCAATGCG ATGAGCATGT TAGCCTTTGT GGTCGGACTG
TTTATTGCCT ATAACGGTGT GCGTTACAGC CTGATGAAAC GCCAACGTCT ATTAATCCAA
TTGCTGCAAC AGGGCTTAGC ACGGCGTGAA GTCATGCTAG CCCTGCTTGG CGAGTTGCTG
CTGTTGGTGG TGTTGGGCTC GCTAATGGGA TTTATCCTAG GATTACAGCT GAGTCACTGG
TTGCAACCTA TGGTCGCTAT GACCTTAGAG CAGCTCTACG GCGCCCACTT GTTGCCGGGG
ATTTGGCAAT GGCGTTGGTT GGCCGAAGCG ATAACCCTCA CCTTAGTCGC CGCCCTAGCC
GCCTGTTTAC CCTTGTATTT TGACTTAACC CGCCAATCCC TCGCCCAAGG CGCTAATCGT
TATCAACAAA CGCAGGCCCA CAACAAAACC CATGGCAGGC AGTTTATCTT AGCCTGCTGC
CTGCTCACGC TCGCCGCAAT ACTCATGCCC TTCAGCCAAA GCTATAACAC CAGTTTGGTA
TTGTTGGGCA TGGTTGCCGT TGCGATTCCA TTGTTATTAC CACAAGTATT GCATTGGGGC
GTTAGCTTGC TGCTGCCATT GACTCGCCCC GGACTTAAGC ACTATCTCCT CGCCGAAACC
CGCGAGCTTA TCGCGCCATT GTCCCTCGCC ATGATGGCGA TACTGCTGGC ACTGAGCGCC
AATGTGTCGA TGAATACCTT GGTCGGTAGC TTCGAGCAAA CCTTAAGAAG CTGGTTAGAA
ACCCGCTTGC ATGCCGATTT ATACCTGCGC CCCAGCGCCA ACCATATGGC CGAAGTGCGC
GATAAATTGA GCCAAGATCC TCGCCTGAGT GGCCTGTATC AGCAATGGCA AGTGGAGGCC
GAAGTATCAC CCCAAGGGGC GGCGCAAACG ATTCCCGTCA ACCTAATTAG CCGCGATGAT
GCATCGATTC AACACACCAG CACACTCAAA CAAAGCTTGC CGGATCTCTG GCAAACTTAC
TTTGAAGGGC GTTACGTGTT AGTCAGCGAA CCCATGGCCA TTAAGTATCA GCTGCAACTC
GGCGATAGTT TGGCGTTAAA TGTGCTAGAC AAAACCGCCA ATAATCCCGT GGTGATCGCC
GGGATTTATT ACGACCATGG TAATACCCGT AATGAGCTCA TCATCAGCCA TGAGCTATGG
CAACGGGCGC AGCTACCCGT GTTACCCATT AGCCTTGCGG CCAGTTTCCA CTCTGTCGAG
CCAGAAGAGC AAACCACTGC GACTCAGCGC AAACTCAGTG AGGCTGAGCT AGATGAACTA
CAAGGGCAAT TGGCCGTTAC ATTGGGCTTA GCACAGGCAC AAATTTACAG CCAAGCCAAG
ATCAAGGCTC AGGCCATTGC CATGTTTAAG CGCACCTTCT CAATCACCTT AGTGCTCAAT
AGCTTAACTT TATTGGTGGC GGCCATTGGG CTATTTAGCG CCTGCTTGAT GTTAACTCAA
TCCAGGCAAG CGCCATTGGC GAGGCTGTAT TCCCTCGGGG TGAGTCGTAA CAAATTGCGG
ACTATGGTGT TCAGCCAAAT GCTGCTAGTC GTGGTCATCA CTTGCCTGAT GGCCATGCCC
ACAGGTGCAC TGCTCGGCTA TTTATTGATT GATAAAATCA CCCTGCAGGC TTTCGGCTGG
ACAATCAAGA TGATATGGGA TTGGTTTGCT TATGGAAAAG CCATCCTCAT TGCCTTAGTG
ACCTGCACCT TAGCCGTACT CTTACCGCTT TACTGGCAAA CCCGCAGGCC CTTAATCGCC
AGTTTGCAGC AGGAAACCCT ATGA
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| Protein sequence | MMSPALTPKA NHSQTRNRPW LRIYWVLKVF LAHYRHAPLQ AGAILLGLAL AVTLLIGVKA
TNDNAIRSYS EATELLSQRA DVFLSAPIGQ ETLDESVYFS LRQAGISQSL AVVSGRVAGL
NGQFWQIEGS DIVAALTASL SSKEEQKHNA STKQAANPKM SMGALPLAEL MSGEPIVVIS
QSLANKIAPN GQLDLAPASF APDKLKVISI DDSWGLGSAI LTDISLAQTL LGMQGKLSYI
ALFSDRDKLP TLKQRLETLG ITPLRASYSQ QDQGQALMAL TRSFHLNLNA MSMLAFVVGL
FIAYNGVRYS LMKRQRLLIQ LLQQGLARRE VMLALLGELL LLVVLGSLMG FILGLQLSHW
LQPMVAMTLE QLYGAHLLPG IWQWRWLAEA ITLTLVAALA ACLPLYFDLT RQSLAQGANR
YQQTQAHNKT HGRQFILACC LLTLAAILMP FSQSYNTSLV LLGMVAVAIP LLLPQVLHWG
VSLLLPLTRP GLKHYLLAET RELIAPLSLA MMAILLALSA NVSMNTLVGS FEQTLRSWLE
TRLHADLYLR PSANHMAEVR DKLSQDPRLS GLYQQWQVEA EVSPQGAAQT IPVNLISRDD
ASIQHTSTLK QSLPDLWQTY FEGRYVLVSE PMAIKYQLQL GDSLALNVLD KTANNPVVIA
GIYYDHGNTR NELIISHELW QRAQLPVLPI SLAASFHSVE PEEQTTATQR KLSEAELDEL
QGQLAVTLGL AQAQIYSQAK IKAQAIAMFK RTFSITLVLN SLTLLVAAIG LFSACLMLTQ
SRQAPLARLY SLGVSRNKLR TMVFSQMLLV VVITCLMAMP TGALLGYLLI DKITLQAFGW
TIKMIWDWFA YGKAILIALV TCTLAVLLPL YWQTRRPLIA SLQQETL
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