Gene Shewana3_3411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3411 
Symbol 
ID4476754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4079364 
End bp4081871 
Gene Length2508 bp 
Protein Length835 aa 
Translation table11 
GC content52% 
IMG OID639728020 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_871040 
Protein GI117921848 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4935] Regulatory P domain of the subtilisin-like proprotein convertases and other proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATAA AACTCTCACC ACTGGCGTTA GCAATTGCAG GAGCGATGAC ACTGTCAGCC 
GTGCCCGCTA TGGCAAAAGA TGCCCCTGTC TATGAAAAAG ATGCCATTCT CGTGGTGTAT
AAAGACAATG CGACGAAGGC GGAGCGCTCG GCGGCTCAGC GTTTAATTCG TGGCACCTTA
ACCGATGCCA ATGCGGATGG TGTCGATGAT AAGTTCCAGC ATTTACTCAA TGGCAAACTG
GCACGTTTAG CCCTGCGTAA GGGCACCAAT ATTGAAGATG CGATTAAGGT GATTAGCCGT
CATCCGGCGG TAAAATATGC CGAACCTAAC TATATTCTCA AGGCTATTGG TACACCTGAT
GATCCAAGCT TTGCTAGCCT GTGGGGCATG AATAACACGG GACAAAACGG TGGCACCGTC
GATGCGGATA TCGATGCTCC AGAAGCGTGG GAAATCACTA CCGGCAGTTC GGATGTGGTG
ATTGGGGTGA TTGACACAGG GGTGGATTAC AATCATCCCG ATCTACAGGC CAACATGTGG
GTGAATGGTG GCGAGATCCC AGGTAACGGC ATCGACGATG ACGGCAACGG CGTGATCGAC
GATGTTCACG GTTACAGCGC GGTCAACAAT AACGGTAACC CAATGGACGG CAACGGCCAT
GGTACCCATG TGTCTGGCAC TATTGGCGCT AAAGGTAATA ACGGCGTGGG TGTTGTTGGG
GTGAACTGGG ACGTTAAAAT CGCCGCCTGT CAGTTCCTCG ATGCCGATGG TTATGGTTCT
ACCGCAGGCG CGATTGCCTG TCTGGACTAC TTTACCGATC TTAAGGTTAA TCATGGGGTT
GATATCAAAG CTACCAACAA CTCTTGGGGC GGCGGCAGCT TTAGCCAAGC CTTAAAAGAT
GCGATTGAAG CGGGTGGTGA AGCAGGCATT TTATTCGTTG CAGCAGCGGG TAATGACGCG
GTGGACAATG ATGCCAGCCC ACATTATCCC TCAAGCTATG ACTCGGATGT GGTGTTGTCT
ATTGCCAGTA CCGACCGTAA TGACCGTATG TCAGATTTCT CACAGTGGGG CTTAACCAGT
GTTGATATGG GCGCGCCTGG CACGGCGATT CTGTCAACCA TCCCAGGCGG TGGCTATGCC
ACTTACTCTG GTACCTCAAT GGCGACGCCC CATGTAACAG GTGCGGCAGC ACTAGTGTGG
TCGTTAAATC CCGATCTCTC ACCAGTAGAA ATGAAAACCT TACTGATGGC ATCGGGTGAT
GCGAATGCGG ACCTCACCGG TAAAACCGTA GCAGGGACTC GCCTCAATGT GGCAAATGCC
TTAGAGCAGG CAAACCCATC CCCTAGCTAT AAGTTTACCG TATCGCCAGC ATCGCAATCG
GTCGAAGCGG GTAACACGGC TAGTTATAAC TTTACTGTCG GTAGTGTGGC AGGGTGGGAA
GGTGATGTGG CGCTTAGCGT AGCCGTGTCT CCAGCGCTTG AAGGCGTATC CTTATCAGCC
TCAACAGTTA CAGCTGGTGG TTCATTTACC TTAGATGTAG CGACAACGGC GCAAACAGCT
TGGGGTGATT ACAGCATTAC AGTAACAGGT ACCGATGGCA CCATTGAAAA GTCTAAAGTC
GTTGCACTGA ATGTGTTCCC ACAGGGATTA AATGACTTTA GCTATGGCAA TGAAAACGCT
GTTGCTATCC CTGATAACAA CACTAATGGC GTGGTAAGCA CTATCGACGT TGCCGACGAT
GTGCAGATTT TTGGTGTGAC CGCCGATGTG AATATCAGCC ACACTTGGAT TGGTGATTTA
CGTGTTGTGT TAACCTCTCC AGCGGGCACC GAAGTGGTTC TGCATAACCG TGAGGGCGGC
AGCGCCGACA ACATCGTTAA GAGCTGGGAC TTAAGCGCGT TTGACGGTGA AAATGCCCGT
GGTACTTGGT CATTATCTGT TGACGACAAT GCGGGCGCGG ATACGGGCAC CCTGAATAAC
TGGGGCTTAG TGATCAGCGG CTTAGGTGAA GCCTCTCCCG CGGCACCTGT AGCAGGTTTC
GAGTATGCGG TTGAAGGCTT AAGCGTTGCC TTTACTAACA CCAGTACCGA TGCAAACGAT
GATATCGTGA GCTATAGCTG GGACTTTGGT GATGACACTA ACTCTAGCGA AATGAACCCA
AGCCATGTGT TTGCTGCCGC TGGCACCTAC AGAGTGTCGC TTACCGTGAC TGACGCCATG
GAGCATAGCA ACACTGTGAC TATGGAAGTG CAAGTGTATG AACATAGTAT CAGTGCCACT
GTCACTCGTG CGCTAGTCTC ACGCCGTGGC AGTGCTATGG TTGATCTCAC ATGGGATAGC
GCCTTAGGTG AAAGCGTGGC CCTGTACCGT GATGGCGAGT TAGTGGCTAC GACTGAAAAC
GATGGTAACT ACCGCGATCG CTTTACAACG ACGGCATCGA GTGTGACGTA CCAAGTGTGT
GAAACCTCGG GCTCACTCTG TTCTGCGGCG GTTGTCGCGC AGTTCTAA
 
Protein sequence
MSIKLSPLAL AIAGAMTLSA VPAMAKDAPV YEKDAILVVY KDNATKAERS AAQRLIRGTL 
TDANADGVDD KFQHLLNGKL ARLALRKGTN IEDAIKVISR HPAVKYAEPN YILKAIGTPD
DPSFASLWGM NNTGQNGGTV DADIDAPEAW EITTGSSDVV IGVIDTGVDY NHPDLQANMW
VNGGEIPGNG IDDDGNGVID DVHGYSAVNN NGNPMDGNGH GTHVSGTIGA KGNNGVGVVG
VNWDVKIAAC QFLDADGYGS TAGAIACLDY FTDLKVNHGV DIKATNNSWG GGSFSQALKD
AIEAGGEAGI LFVAAAGNDA VDNDASPHYP SSYDSDVVLS IASTDRNDRM SDFSQWGLTS
VDMGAPGTAI LSTIPGGGYA TYSGTSMATP HVTGAAALVW SLNPDLSPVE MKTLLMASGD
ANADLTGKTV AGTRLNVANA LEQANPSPSY KFTVSPASQS VEAGNTASYN FTVGSVAGWE
GDVALSVAVS PALEGVSLSA STVTAGGSFT LDVATTAQTA WGDYSITVTG TDGTIEKSKV
VALNVFPQGL NDFSYGNENA VAIPDNNTNG VVSTIDVADD VQIFGVTADV NISHTWIGDL
RVVLTSPAGT EVVLHNREGG SADNIVKSWD LSAFDGENAR GTWSLSVDDN AGADTGTLNN
WGLVISGLGE ASPAAPVAGF EYAVEGLSVA FTNTSTDAND DIVSYSWDFG DDTNSSEMNP
SHVFAAAGTY RVSLTVTDAM EHSNTVTMEV QVYEHSISAT VTRALVSRRG SAMVDLTWDS
ALGESVALYR DGELVATTEN DGNYRDRFTT TASSVTYQVC ETSGSLCSAA VVAQF