Gene Shewana3_3407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3407 
Symbol 
ID4476750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4076228 
End bp4076716 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content51% 
IMG OID639728016 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_871036 
Protein GI117921844 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0892648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAGG TTTTTGTCGC CCTCGGGGCT AATCTTGAAG ATCCTAAAGC TCAGCTGGAC 
AATGCCGTTG CGGCCTTGTC CGCCTTGGCT GAACATCAGA GTCTTAAGGT ATCGCCCTAT
TACGGTTCCA CCCCCATGGG GGACGTAGTG CAACCCGACT ATATCAATGC CGTTGCCAGC
TTTGAGACCT CTCTGGCACC CATCGCCCTG TTAGATGCAC TGCAAGAGAT TGAAAACACT
CAGGGCCGTG TTCGTAAAGA ACGTTGGGGC CCCAGAACCT TAGATCTCGA CTTACTCTTA
TATGGCGATG CCATTATCGA TGAGCCCAGA CTCAAAGTGC CACACTACGG CATGAAGGAG
CGTAGTTTTG TGCTAGTGCC CTTGGCGGCC ATAGCACCGG ATCTGGTGTT ACCTTGTAAA
ACGCCGCTAC GCAGCCTTAT CAGTGAAAAA TTCTTGGCCG AGTTACAACT ACTGGGCAAT
GATCATTGA
 
Protein sequence
MTQVFVALGA NLEDPKAQLD NAVAALSALA EHQSLKVSPY YGSTPMGDVV QPDYINAVAS 
FETSLAPIAL LDALQEIENT QGRVRKERWG PRTLDLDLLL YGDAIIDEPR LKVPHYGMKE
RSFVLVPLAA IAPDLVLPCK TPLRSLISEK FLAELQLLGN DH