Gene Shewana3_3368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3368 
Symbol 
ID4478501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4039495 
End bp4040517 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content50% 
IMG OID639727978 
ProductMarR family transcriptional regulator 
Protein accessionYP_870998 
Protein GI117921806 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1246] N-acetylglutamate synthase and related acetyltransferases
[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGAA CTGAGCCACA GCCTGCCCAC ACAAGTGCTT GCATGGCTCA ACTTTGGTTA 
ACCCTGATGG CATTCAATCC GACTATGGCA AATGATCCCG GCTCATCTAG CCAACTGAGA
CACCTTTCCC GCTATATGGT CAGACACTTA GGCATGCTCA ATGCGGCCTT TGGCGATTTA
CCTCTGTCCC CAGTACAGGC CCACGCCTTG TTTGAGATAG GCAATCAACC GCAAACCATT
AAGGAACTCG CCTGCAAACT GAGCATAGAT AAATCCAATG CTAGCCGAGC AATCAAACAC
TTAGTCGATA AAAACCTCGC CCAGAGCCAA ATGCATCCGC GGGATAATCG CTGCCTCGTC
GTTCAACTGA CTCCTGCGGG TAAAAAGCTG CTCGCAAAAT TAGATAGCCA GCAAAATCAA
CTCTTTCAAG AAATCTTGGC CCAGCTGACC CCTGAGCAAA TTCAACAAAT CGAGCAAGCT
CTTATGCAAT ACAACCAAGC CATACATAAA GCCAAACAAC AATCGGGTTA TCTTATCCGT
GAAGCGACCG CCGCCGATGA TGCCGCCATT GCTCAAGTGA TCCGCGCGGT TTCCGCCGAA
TACGGTTTAA CTGCAGATAA AGGCTATAGC GTTGCCGATC CGACCTTAGA TTGTTTAAGC
CAAATCTATT CGCAGCCGGG CGCCCAATAC TGGGTGATAG AGCATGAAGG CCAAGTGGTT
GGCGGCGCGG GCATAGCGCC ACTGGCTAAC AATGAAGGAA TTTGTGAGCT GCAAAAAATG
TACTTTATGC CCGAGATCCG CGGTAAAGGC TTAGCCAAAC GTTTAGCGCT GCAGGCTCTA
GAGTTTGCGC GTGAAGCGGG TTATCAGAGC TGTTACCTCG AAACCACCGC ATTACTCAAA
GAGGCCCTAA AACTCTACGA ACACTTAGGT TTTAACTACC TAAGCGCCCC ACTTGGCAAT
ACTGGCCACG ACGCCTGTGA GATCCCAATG CTATTGCCAC TGCACGCCGA ACTGAATGAA
TAG
 
Protein sequence
MIRTEPQPAH TSACMAQLWL TLMAFNPTMA NDPGSSSQLR HLSRYMVRHL GMLNAAFGDL 
PLSPVQAHAL FEIGNQPQTI KELACKLSID KSNASRAIKH LVDKNLAQSQ MHPRDNRCLV
VQLTPAGKKL LAKLDSQQNQ LFQEILAQLT PEQIQQIEQA LMQYNQAIHK AKQQSGYLIR
EATAADDAAI AQVIRAVSAE YGLTADKGYS VADPTLDCLS QIYSQPGAQY WVIEHEGQVV
GGAGIAPLAN NEGICELQKM YFMPEIRGKG LAKRLALQAL EFAREAGYQS CYLETTALLK
EALKLYEHLG FNYLSAPLGN TGHDACEIPM LLPLHAELNE