Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3348 |
Symbol | |
ID | 4477649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4016318 |
End bp | 4017787 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639727958 |
Product | Na+/H+ antiporter |
Protein accession | YP_870978 |
Protein GI | 117921786 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
TIGRFAM ID | [TIGR00775] Na+/H+ antiporter, NhaD family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.017498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTAC AGCGGTGGTT TAAAAACAGT GGAGTGGTGC TCGCTAGCCT ATTCTGCGTT GCAATATTGA GCGGATTCTC ACCAGCAGTT TGGGCAATGA CCGAAGGAAC AGAACGGCTC GATTTAACCG CTGCATCAGT GGGGTATATT GCCGTATGCG TCTTCGTGCT CGCCTATATT TTGGTGATGG CCGAAGAGGC GCTGCACCTG CGTAAATCCA AACCCGTATT GGTCGCAGCC GGCATTATTT GGGGCATGAT AGGTTTTGTG TATGTGCAAA ATGGCATGTC GGAGGTTTCC GAGGCAGCCT TTAAGCACAA TCTACTGGAA TACGCCGAGT TATTACTCTT CCTATTAGTG GCGATGACTT ATATCAACGC CATGGAGGAA CGTAACTTAT TCGATGCGAT CCGCGGTTGG CTAGTCGGAC GGGGATTTAG TCTGCGAACC GTGTTCTGGC TGACGGGGTT TATGGCGTTC TTTATCTCGC CAGTGGCCGA TAACTTAACC ACTGCATTAT TGATGTGTGC CGTGGTGATG AAGGTCGGCG CGGGGCAGCG CAAATTTATT ACGCTGGCGT GTATCAACAT TGTGGTTGCG GCGAATGCGG GCGGTGCCTT TAGTCCCTTT GGTGATATCA CCACCCTGAT GGTGTGGCAA AAGGGCTTAG TGCACTTTGC TGACTTCTTC CATCTGTTTA TTCCCGCCTT GGTCAACTTT GCCTTGCCTG CGGCGATTAT GAGCGTGTTT ATCCCACGTT ATGTGCCAGA GCCTGAAAAA GAGCAGGTGT ACACTAAACC CGGTGCTAAA CGTATCGTGG CGTTATTCCT GCTGACCATT GCGACGGCGG TGTGTGCTCA TTCCTTCTTC GGCATGCCAC CTGTGCTTGG GATGATGACG GGTCTGGGCT TCCTGCAGTT CTTCGGTTAT TACCTGCGTA AGACCTTCGA TAAATCCGTT GCTCGTGAGC GTGCGAAGGC GGAATTACGT CAGGATAAAC AACGGCTACA ACAACTTGGC AGCGTGGTGC CCTTCGATGT GTTTAGCCGG ATTTCCCGCG CCGAATGGGA TACCTTACTG TTCTTCTACG GTGTGGTGTT ATGTGTGGGC GGCCTTGGCT TTATGGGGTA TTTAAGCTTA GTGTCTGAGG CACTGTATTC CCATTGGGAT GCAACCTATG CCAACGTGGC TATCGGTCTG TTGTCTTCCA TTGTCGATAA CATTCCAGTG ATGTTCGCCG TGTTGACCAT GAACCCAGAG ATGGCCCTCG GTCAATGGTT ACTGGTGACC TTAACCGCGG GCGTTGGGGG CAGTTTGTTA TCCATCGGCA GTGCGGCAGG GGTTGCCTTG ATGGGACAGG CGAGGGGGAT TTACACCTTC GGCGCCCATT TACGTTGGAC GCCTGTGATC GCGCTTGGCT ATATTGCTAG CATTTTGGTA CATATGTGGC TCAATGCGGC AATGTTCTAA
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Protein sequence | MKLQRWFKNS GVVLASLFCV AILSGFSPAV WAMTEGTERL DLTAASVGYI AVCVFVLAYI LVMAEEALHL RKSKPVLVAA GIIWGMIGFV YVQNGMSEVS EAAFKHNLLE YAELLLFLLV AMTYINAMEE RNLFDAIRGW LVGRGFSLRT VFWLTGFMAF FISPVADNLT TALLMCAVVM KVGAGQRKFI TLACINIVVA ANAGGAFSPF GDITTLMVWQ KGLVHFADFF HLFIPALVNF ALPAAIMSVF IPRYVPEPEK EQVYTKPGAK RIVALFLLTI ATAVCAHSFF GMPPVLGMMT GLGFLQFFGY YLRKTFDKSV ARERAKAELR QDKQRLQQLG SVVPFDVFSR ISRAEWDTLL FFYGVVLCVG GLGFMGYLSL VSEALYSHWD ATYANVAIGL LSSIVDNIPV MFAVLTMNPE MALGQWLLVT LTAGVGGSLL SIGSAAGVAL MGQARGIYTF GAHLRWTPVI ALGYIASILV HMWLNAAMF
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