| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3336 |
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| Symbol | |
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| ID | 4477637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4001048 |
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| End bp | 4002307 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639727946 |
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| Product | ATP-dependent RNA helicase SrmB |
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| Protein accession | YP_870966 |
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| Protein GI | 117921774 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTTG AAGATTTTCA GCTTGACCCT AGCTTATTAG AGTCACTTAA AGCCATGGGG
CACCTGTCGC CCACCACCAT CCAGCAAGAA ACCCTGCCTC ATGCCCTCGA GCAGCGGGAT
ATTTTGGCGC GCGCCCCGAC GGGTACAGGT AAAACCGCCA GCTTCTTATT GCCAGCACTG
CAACACTTAA TCGACTTTCC CCGTCGCTAT TCTGGCCATG CACGAATTTT GATCCTGACG
CCAACCCGTG AGTTAGCCAG CCAAATTCAC CGTTATGCCT GCCACTTAGC CACAGGCCAA
GGGCTGAATA TCGCCATTAT CACCGGCGGT GTGCCCTATG GTCCGCAGGA AGAAGCCCTA
AAAGACAATA TCGATATTCT GGTCGCGACG CCTGGCCGTC TGATGGAATA TTTAGATAAA
GGCAAATTCA GCGCGGAATC GGTCGACATA CTGATCATCG ACGAAGCCGA CCGCATGCTC
GATATGGGGT TCTCCGCCGT GGTGAAAGCC ATTGCCCTCG AAGCCCAAGG TCGTAAGCAA
AATATGCTGT TTTCGGCCAC CCTCGAAGGC AGCGGCGTTA TCCGTTTTGC CCGCGAAGTG
CTTAACGATC CTATCGAAAT CGATGTTGAC GCACCGCGTA AAGAGAAGGC CAAGATCCAC
CAATGGATCC ACCTTGCCGA CGATAAAGAA CATAAGATTG CTCTGCTGTG CTATCTGCTC
AAGCAGGAAG ACGTTAAACG CGCCATCGTA TTCGTGAAGA CTCGCGATGT GGTTTCTAGC
CTAGAAGGCC AACTGCTTAA AGCCGGTATT CCCTGCGCCT TTATGCGTGG CGATATGGAA
CAGAAGAAAC GCTTCCAAGC CTTAAGCCGC TTTACCAAAG GTGAAGTGAA TGTGTTACTC
GCGACCGATG TGGCCGCCCG TGGTATCGAT ATCGACGATA TCAGCCATGT GATTAACTTC
GACATGCCAC GTTCTGCCGA TAGTTACATC CACCGTATTG GTCGTACTGG CCGCGCGGGG
GCAAAAGGAA CGGCAATTTC ATTGGCCGAA GCCCACGATA TGCGGATTGT CGGTAAGATT
GAGCGTTATA TCGAGCAGCC GCTTAAACGC CGCATCATCG AGGAACTGCG TCCTAAACAT
AAAGAGGCGC GCGTGCCGAC TAAGAAAAAG GCCAAAGTAA AAGCCAAGGA AGCCGCGAAG
CGAACCAGCA AAAAAGAAGC TGCTAAAAAG GCCAGTAAAA TTGCACGTAA GAAGCAATAA
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| Protein sequence | MQFEDFQLDP SLLESLKAMG HLSPTTIQQE TLPHALEQRD ILARAPTGTG KTASFLLPAL
QHLIDFPRRY SGHARILILT PTRELASQIH RYACHLATGQ GLNIAIITGG VPYGPQEEAL
KDNIDILVAT PGRLMEYLDK GKFSAESVDI LIIDEADRML DMGFSAVVKA IALEAQGRKQ
NMLFSATLEG SGVIRFAREV LNDPIEIDVD APRKEKAKIH QWIHLADDKE HKIALLCYLL
KQEDVKRAIV FVKTRDVVSS LEGQLLKAGI PCAFMRGDME QKKRFQALSR FTKGEVNVLL
ATDVAARGID IDDISHVINF DMPRSADSYI HRIGRTGRAG AKGTAISLAE AHDMRIVGKI
ERYIEQPLKR RIIEELRPKH KEARVPTKKK AKVKAKEAAK RTSKKEAAKK ASKIARKKQ
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